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L3_105_245G1_scaffold_775

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_775_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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158..1984
DNA (1827bp) protein (609aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=2 Tax=Clostridium RepID=B6FJ69_9CLOT
L3_105_245G1_scaffold_775_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2076..3569
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PG12_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22495.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
L3_105_245G1_scaffold_775_3
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3711..4946
DNA (1236bp) protein (412aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Clostridium nexile CAG:348 RepID=R6PNR8_9CLOT
L3_105_245G1_scaffold_775_4
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5128..7371
DNA (2244bp) protein (748aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R6PDV5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22493.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
copper-translocating P-type ATPase
L3_105_245G1_scaffold_775_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7383..7682
DNA (300bp) protein (100aa)
Copper-sensing transcriptional repressor CsoR n=2 Tax=Clostridium RepID=B6FJ65_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22492.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_105_245G1_scaffold_775_6
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7696..7893
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PVH9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22491.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
heavy metal transport/detoxification protein
L3_105_245G1_scaffold_775_7
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7932..9704
DNA (1773bp) protein (591aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PG07_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22490.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_105_245G1_scaffold_775_8
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9717..10391
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PNR2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22489.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_105_245G1_scaffold_775_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10456..10677
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJ61_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83953.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_105_245G1_scaffold_775_10
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10674..10943
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJ60_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83952.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_105_245G1_scaffold_775_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10947..11369
DNA (423bp) protein (141aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FJ59_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA83951.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Mn-containing catalase
L3_105_245G1_scaffold_775_12
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11438..13009)
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2ZQP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD66229.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_105_245G1_scaffold_775_13
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13094..13237)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z7P6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM50953.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L3_105_245G1_scaffold_775_14
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13576..13812)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MLL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS71925.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
L3_105_245G1_scaffold_775_15
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13812..14231)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MMN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS71926.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
DNA-directed RNA polymerase specialized sigma subunit
L3_105_245G1_scaffold_775_16
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14770..15126
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BBC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26839.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
Helix-turn-helix.
L3_105_245G1_scaffold_775_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15187..15372)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Clostridium difficile E24 RepID=U3YZJ9_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL31923.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
hypothetical protein
L3_105_245G1_scaffold_775_18
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15403..15633)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RGF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK52628.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L3_105_245G1_scaffold_775_19
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15775..16500)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YW36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD56004.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
hypothetical protein
Displaying 19 items

View Taxonomy