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L3_105_245G1_scaffold_800

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_800_1
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..185)
DNA (183bp) protein (61aa)
Cytochrome c-type biogenesis protein CcmE n=1 Tax=Escherichia coli MP021017.5 RepID=M8LK36_ECOLX
ccmE; cytochrome c-type biogenesis protein CcmE
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; TaxID=766138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 965-58.;"
L3_105_245G1_scaffold_800_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(182..391)
DNA (210bp) protein (70aa)
Heme exporter protein D n=1376 Tax=Enterobacteriaceae RepID=CCMD_ECO57
ccmD; heme exporter protein CcmD
Heme exporter protein CcmD {ECO:0000313|EMBL:EHU42437.1}; TaxID=868140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2C.;"
L3_105_245G1_scaffold_800_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(388..1125)
DNA (738bp) protein (246aa)
Heme exporter protein C n=1371 Tax=Enterobacteriaceae RepID=CCMC_ECO57
ccmC; heme exporter protein CcmC
CcmC {ECO:0000313|EMBL:EHU54851.1}; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
L3_105_245G1_scaffold_800_4
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1167..1829)
DNA (663bp) protein (221aa)
Heme exporter protein B n=1164 Tax=Enterobacteriaceae RepID=CCMB_ECO57
heme exporter protein CcmB
Heme exporter protein B {ECO:0000256|PIRNR:PIRNR002764}; TaxID=941429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae CDC 74-1112.;"
L3_105_245G1_scaffold_800_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1826..2443)
DNA (618bp) protein (206aa)
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; TaxID=1268977 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113302.;"
Heme exporter subunit ATP-binding component of ABC superfamily n=37 Tax=Escherichia coli RepID=B7M551_ECO8A
ccmA; cytochrome c biogenesis protein CcmA
L3_105_245G1_scaffold_800_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2462..3064)
DNA (603bp) protein (201aa)
Cytochrome c-type protein NapC n=1279 Tax=Enterobacteriaceae RepID=NAPC_ECO57
napC; cytochrome c-type protein napC
Cytochrome c-type protein {ECO:0000256|PIRNR:PIRNR000013}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L3_105_245G1_scaffold_800_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3074..3523)
DNA (450bp) protein (150aa)
Periplasmic nitrate reductase, electron transfer subunit n=585 Tax=Enterobacteriaceae RepID=J7QTB6_ECOLX
napB; citrate reductase cytochrome C subunit
Periplasmic nitrate reductase, electron transfer subunit {ECO:0000256|PIRNR:PIRNR006105}; Diheme cytochrome c NapB {ECO:0000256|PIRNR:PIRNR006105}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
L3_105_245G1_scaffold_800_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3520..4383)
DNA (864bp) protein (288aa)
Periplasmic nitrate reductase, NapH n=5 Tax=Escherichia coli RepID=B3IHL0_ECOLX
Ferredoxin {ECO:0000313|EMBL:ESP08195.1}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
napH; quinol dehydrogenase membrane component
L3_105_245G1_scaffold_800_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4370..5065)
DNA (696bp) protein (232aa)
Ferredoxin-type protein NapG n=1096 Tax=Enterobacteriaceae RepID=NAPG_ECOL6
methylamine utilization ferredoxin-type protein MauM
Ferredoxin {ECO:0000313|EMBL:EQQ07859.1}; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 87 (4-5977630).;"
L3_105_245G1_scaffold_800_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5072..7558)
DNA (2487bp) protein (829aa)
Nitrate reductase {ECO:0000256|HAMAP-Rule:MF_01630, ECO:0000256|SAAS:SAAS00064461}; EC=1.7.99.4 {ECO:0000256|HAMAP-Rule:MF_01630, ECO:0000256|SAAS:SAAS00064461};; Flags: Precursor;; TaxID=1182703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE107.;"
Periplasmic nitrate reductase n=448 Tax=Enterobacteriaceae RepID=NAPA_ECOHS
napA; nitrate reductase catalytic subunit
L3_105_245G1_scaffold_800_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7555..7818)
DNA (264bp) protein (88aa)
napD; assembly protein for periplasmic nitrate reductase (EC:1.7.99.4)
Protein NapD n=1009 Tax=Enterobacteriaceae RepID=NAPD_ECO57
NapD family protein {ECO:0000313|EMBL:EMX86614.1}; TaxID=1116119 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2719100.;"
L3_105_245G1_scaffold_800_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7808..8302)
DNA (495bp) protein (165aa)
Ferredoxin-type protein NapF n=966 Tax=Enterobacteriaceae RepID=NAPF_ECO57
napF; ferredoxin-type protein
Ferredoxin-type protein NapF {ECO:0000313|EMBL:KEJ46490.1}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
L3_105_245G1_scaffold_800_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8411..8575
DNA (165bp) protein (55aa)
Uncharacterized protein n=264 Tax=Enterobacteriaceae RepID=J7QFS9_ECOLX
hypothetical protein
Putative triose phosphate isomerase monomer {ECO:0000313|EMBL:EMU69383.1}; TaxID=1116135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.12.;"
L3_105_245G1_scaffold_800_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8710..9198
DNA (489bp) protein (163aa)
Ecotin n=695 Tax=Enterobacteriaceae RepID=ECOT_ECO24
eco; ecotin
Ecotin {ECO:0000256|HAMAP-Rule:MF_00706, ECO:0000256|SAAS:SAAS00013245}; Flags: Precursor;; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
L3_105_245G1_scaffold_800_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9347..10993)
DNA (1647bp) protein (549aa)
mqo; malate:quinone oxidoreductase (EC:1.1.5.4)
Probable malate:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00212}; EC=1.1.5.4 {ECO:0000256|HAMAP-Rule:MF_00212};; MQO {ECO:0000256|HAMAP-Rule:MF_00212}; Malate dehydrogenase [quinone] {ECO:0000256|HAMAP-Rule:MF_00212}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
Probable malate:quinone oxidoreductase n=181 Tax=Enterobacteriaceae RepID=MQO_ECO24
L3_105_245G1_scaffold_800_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11211..12854)
DNA (1644bp) protein (548aa)
ABC transporter ATP-binding protein n=159 Tax=Escherichia coli RepID=A7ZP33_ECO24
yojI; multidrug transporter membrane component/ATP-binding component
Cyclic peptide transporter {ECO:0000313|EMBL:EIH47194.1}; TaxID=869678 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 99.0741.;"
L3_105_245G1_scaffold_800_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12930..13580)
DNA (651bp) protein (217aa)
Alkylated DNA repair protein AlkB n=87 Tax=Escherichia coli RepID=A7ZP34_ECO24
alkB; oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions
Alpha-ketoglutarate-dependent dioxygenase AlkB {ECO:0000313|EMBL:AFS73581.1}; TaxID=1133852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O104:H4 (strain 2011C-3493).;"
L3_105_245G1_scaffold_800_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13580..14644)
DNA (1065bp) protein (355aa)
Regulatory protein ada {ECO:0000313|EMBL:EIG94055.1}; EC=2.1.1.63 {ECO:0000313|EMBL:EIG94055.1};; TaxID=869670 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 97.0246.;"
Bifunctional transcriptional activator/DNA repair enzyme Ada n=158 Tax=Escherichia RepID=ADA_ECOLI
ada; fused DNA-binding transcriptional dual regulator / O6-methylguanine-DNA methyltransferase
L3_105_245G1_scaffold_800_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14718..15773)
DNA (1056bp) protein (352aa)
Thiamine biosynthesis lipoprotein ApbE n=59 Tax=Escherichia coli RepID=J9ZJB6_ECO14
thiamine biosynthesis lipoprotein ApbE
Thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:AFS73579.1}; TaxID=1133852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O104:H4 (strain 2011C-3493).;"
L3_105_245G1_scaffold_800_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15885..16022)
DNA (138bp) protein (46aa)
Outer membrane protein C n=1 Tax=Shigella flexneri CCH060 RepID=I6BRH0_SHIFL
ompC; outer membrane porin protein C
Outer membrane protein C {ECO:0000313|EMBL:ELD98923.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
Displaying 20 items

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