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L3_105_245G1_scaffold_822

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_822_1
unknown

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comp(2..145)
DNA (144bp) protein (48aa)

This feature has no annotations

L3_105_245G1_scaffold_822_2
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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251..1888
DNA (1638bp) protein (546aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RIK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35917.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_105_245G1_scaffold_822_3
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2039..2983)
DNA (945bp) protein (315aa)
Transketolase, C-terminal subunit (EC:2.2.1.1)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DHQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX75456.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
L3_105_245G1_scaffold_822_4
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2971..3807)
DNA (837bp) protein (279aa)
Transketolase, N-terminal subunit (EC:2.2.1.1)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WSF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06891.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L3_105_245G1_scaffold_822_5
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3841..4494)
DNA (654bp) protein (218aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
transaldolase, putative, TalC family (EC:2.2.1.2)
Probable transaldolase n=1 Tax=Blautia sp. CAG:237 RepID=R6KMK0_9FIRM
L3_105_245G1_scaffold_822_6
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4767..5852)
DNA (1086bp) protein (362aa)
Sugar-binding domain protein n=2 Tax=Coprococcus RepID=C0BEW0_9FIRM
Sugar-binding domain protein {ECO:0000313|EMBL:EEG87805.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
putative transcriptional regulator
L3_105_245G1_scaffold_822_7
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

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comp(5920..6516)
DNA (597bp) protein (199aa)
Recombination protein RecR n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XXI6_9FIRM
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
recombination protein RecR
L3_105_245G1_scaffold_822_8
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6534..6887)
DNA (354bp) protein (118aa)
Nucleoid-associated protein HMPREF0240_03948 n=1 Tax=Clostridium sp. D5 RepID=F0Z497_9CLOT
Nucleoid-associated protein HMPREF0240_03948 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
conserved hypothetical protein TIGR00103
L3_105_245G1_scaffold_822_9
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6900..8480)
DNA (1581bp) protein (527aa)
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:EEG87809.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EEG87809.1};; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
DNA polymerase III, subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III, subunit gamma and tau n=2 Tax=Coprococcus RepID=C0BEW4_9FIRM
L3_105_245G1_scaffold_822_10
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8525..9607)
DNA (1083bp) protein (361aa)
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=2 Tax=Coprococcus RepID=C0BEW5_9FIRM
Phosphofructokinase {ECO:0000313|EMBL:EEG87810.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
L3_105_245G1_scaffold_822_11
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9853..10716
DNA (864bp) protein (288aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Coprococcus comes CAG:19 RepID=R6LFR3_9FIRM
L3_105_245G1_scaffold_822_12
unknown

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comp(11105..11428)
DNA (324bp) protein (108aa)

This feature has no annotations

L3_105_245G1_scaffold_822_13
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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11684..12091
DNA (408bp) protein (136aa)
hypothetical protein (EC:2.7.6.5)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H4S4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23019.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_105_245G1_scaffold_822_14
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

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12137..12589
DNA (453bp) protein (151aa)
hypothetical protein (EC:2.7.6.5)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H4S4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23019.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_105_245G1_scaffold_822_15
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

12605..12832
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5H083_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23020.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
L3_105_245G1_scaffold_822_16
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

12825..13358
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HE79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY23021.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
hypothetical protein
L3_105_245G1_scaffold_822_17
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13398..14534)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6D3P4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA78746.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
dipeptidase
L3_105_245G1_scaffold_822_18
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14518..15540)
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000369288F
MATE efflux family protein {ECO:0000313|EMBL:CDB19950.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
MATE efflux family protein
Displaying 18 items

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