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L3_105_245G1_scaffold_941

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_941_1
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..800)
DNA (798bp) protein (266aa)
yqxC; putative rRNA methyltransferase YqxC (EC:2.1.1.-)
Putative rRNA methyltransferase YqxC {ECO:0000313|EMBL:AGX43654.1}; EC=2.1.1.- {ECO:0000313|EMBL:AGX43654.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Putative rRNA methyltransferase YqxC n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MS71_CLOSA
L3_105_245G1_scaffold_941_2
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(812..2665)
DNA (1854bp) protein (618aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M123_9CLOT
1-deoxy-D-xylulose-5-phosphate synthase
L3_105_245G1_scaffold_941_3
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2682..3554)
DNA (873bp) protein (291aa)
ispA; farnesyl diphosphate synthase IspA (EC:2.5.1.10)
Farnesyl diphosphate synthase IspA {ECO:0000313|EMBL:AGX43656.1}; EC=2.5.1.10 {ECO:0000313|EMBL:AGX43656.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Farnesyl diphosphate synthase IspA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVI6_CLOSA
L3_105_245G1_scaffold_941_4
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3541..3762)
DNA (222bp) protein (74aa)
exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Exodeoxyribonuclease 7 small subunit n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MW36_CLOSA
L3_105_245G1_scaffold_941_5
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3765..4970)
DNA (1206bp) protein (402aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
Exodeoxyribonuclease 7 large subunit n=1 Tax=Clostridium sp. DL-VIII RepID=G7M120_9CLOT
xseA; exodeoxyribonuclease VII large subunit
L3_105_245G1_scaffold_941_6
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4960..5808)
DNA (849bp) protein (283aa)
folD1; bifunctional protein FolD (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MF10_9CLOT
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_105_245G1_scaffold_941_7
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5833..6237)
DNA (405bp) protein (135aa)
N utilization substance protein B homolog n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MJL2_9CLOT
nusB; N utilization substance protein B
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_105_245G1_scaffold_941_8
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6358..6738)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVJ2_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX43661.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_105_245G1_scaffold_941_9
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6825..7382)
DNA (558bp) protein (186aa)
Stage III sporulation protein AH n=5 Tax=Clostridium butyricum RepID=B1QW21_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ88432.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
SpoIIIAH-like protein
L3_105_245G1_scaffold_941_10
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7389..7988)
DNA (600bp) protein (200aa)
Stage III sporulation protein AG n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MT03_CLOSA
stage III sporulation protein AG
Stage III sporulation protein AG {ECO:0000313|EMBL:AGX43663.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_105_245G1_scaffold_941_11
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8001..8591)
DNA (591bp) protein (197aa)
Stage III sporulation protein AF n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MS80_CLOSA
stage III sporulation protein AF
Stage III sporulation protein AF {ECO:0000313|EMBL:AGX43664.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_105_245G1_scaffold_941_12
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8597..9823)
DNA (1227bp) protein (409aa)
stage III sporulation protein AE n=1 Tax=Clostridium beijerinckii RepID=UPI0002DEF137
spoIIIAE; stage III sporulation protein AE
Sporulation stage III, protein AE {ECO:0000313|EMBL:AJG98436.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
L3_105_245G1_scaffold_941_13
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9833..10216)
DNA (384bp) protein (128aa)
Sporulation stage III, protein AD n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVJ6_CLOSA
sporulation stage III, protein AD
Sporulation stage III, protein AD {ECO:0000313|EMBL:AGX43666.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_105_245G1_scaffold_941_14
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10226..10423)
DNA (198bp) protein (66aa)
Stage III sporulation protein AC n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MW44_CLOSA
stage III sporulation protein AC
Stage III sporulation protein AC {ECO:0000313|EMBL:AGX43667.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_105_245G1_scaffold_941_15
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10455..10973)
DNA (519bp) protein (173aa)
Stage III sporulation protein AB n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G175_CLOPA
Stage III sporulation protein SpoAB {ECO:0000313|EMBL:AJG98433.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
stage III sporulation protein SpoAB
L3_105_245G1_scaffold_941_16
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10961..11896)
DNA (936bp) protein (312aa)
Stage III sporulation protein AA n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TE09_9CLOT
Stage III sporulation protein AA {ECO:0000313|EMBL:EKQ58203.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
sporulation stage III, protein AA
L3_105_245G1_scaffold_941_17
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12101..12463)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LU33_CLOB8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR33863.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L3_105_245G1_scaffold_941_18
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12546..13103)
DNA (558bp) protein (186aa)
UPI0003D65E4E related cluster n=1 Tax=unknown RepID=UPI0003D65E4E
efp; elongation factor P
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_105_245G1_scaffold_941_19
unknown

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13157..13228
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 19 items

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