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L3_105_245G1_scaffold_2248

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_2248_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..225
DNA (225bp) protein (75aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071044};; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
Phosphoribosyl-ATP pyrophosphatase n=19 Tax=Bifidobacterium RepID=HIS2_BIFLD
phosphoribosyl-ATP pyrophosphatase
L3_105_245G1_scaffold_2248_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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237..1088
DNA (852bp) protein (284aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302};; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
ATP phosphoribosyltransferase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=HIS1_BIFLS
L3_105_245G1_scaffold_2248_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1102..1719
DNA (618bp) protein (206aa)
Phosphatidylglycerophosphate synthase n=4 Tax=Bifidobacterium RepID=B3DS04_BIFLD
pgsA2; phosphatidylglycerophosphate synthase
Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:EEI80243.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L3_105_245G1_scaffold_2248_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1709..2686
DNA (978bp) protein (326aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=E8MKB4_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEF09558.1}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
L3_105_245G1_scaffold_2248_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2686..3018
DNA (333bp) protein (111aa)
Uncharacterized protein n=19 Tax=Bifidobacterium RepID=B3DS02_BIFLD
hypothetical protein
PF06947 family protein {ECO:0000313|EMBL:EIJ25547.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_105_245G1_scaffold_2248_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3034..3855
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GRM0_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ52450.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_105_245G1_scaffold_2248_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3862..4305
DNA (444bp) protein (148aa)
Uncharacterized protein n=10 Tax=Bifidobacterium longum RepID=B3DS00_BIFLD
hypothetical protein
FHA domain containing protein {ECO:0000313|EMBL:ACJ52449.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_105_245G1_scaffold_2248_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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4405..5037
DNA (633bp) protein (211aa)
SoxR-type transcriptional regulator n=10 Tax=Bifidobacterium RepID=B3DRZ9_BIFLD
hypothetical protein
Putative transcriptional regulator, MerR family {ECO:0000313|EMBL:ACJ52448.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_105_245G1_scaffold_2248_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5169..5600
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GRL7_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEF01107.1}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
L3_105_245G1_scaffold_2248_10
Gardnerella vaginalis, Gardnerella, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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5954..7075
DNA (1122bp) protein (374aa)
Histidine kinase n=1 Tax=Gardnerella vaginalis 5-1 RepID=D6T0Y4_GARVA
Histidine kinase {ECO:0000313|EMBL:EFH71274.1}; TaxID=682148 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis 5-1.;"
signal transduction histidine kinase
Displaying 10 items

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