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L3_105_245G1_scaffold_1651

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_1651_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..694)
DNA (693bp) protein (231aa)
60 kDa inner membrane insertion protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) PF5_BIFLS">RepID=B7GPF5_BIFLS
60 kDa inner membrane insertion protein
Membrane protein {ECO:0000313|EMBL:KEY32394.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L3_105_245G1_scaffold_1651_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1005..1364)
DNA (360bp) protein (120aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Ribonuclease P protein component n=17 Tax=Bifidobacterium RepID=RNPA_BIFLD
ribonuclease P
L3_105_245G1_scaffold_1651_3
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1397..1531)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=6 Tax=Bifidobacterium longum RepID=D6DAZ7_BIFLN
LSU ribosomal protein L34P
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
L3_105_245G1_scaffold_1651_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1850..3352
DNA (1503bp) protein (501aa)
Chromosomal replication initiator protein DnaA n=3 Tax=Bifidobacterium longum RepID=DNAA_BIFLS
chromosomal replication initiator protein DnaA
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L3_105_245G1_scaffold_1651_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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4087..5211
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
DNA polymerase III subunit beta n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GSG1_BIFLS
L3_105_245G1_scaffold_1651_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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5239..6477
DNA (1239bp) protein (413aa)
DNA replication and repair protein RecF n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=RECF_BIFLS
DNA replication and repair protein RecF
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|SAAS:SAAS00122784}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
L3_105_245G1_scaffold_1651_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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6474..6944
DNA (471bp) protein (157aa)
UPF0232 protein BL0636 n=3 Tax=Bifidobacterium RepID=Y636_BIFLO
hypothetical protein
UPF0232 protein BLONG_0004 {ECO:0000256|HAMAP-Rule:MF_00630}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L3_105_245G1_scaffold_1651_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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7077..7796
DNA (720bp) protein (240aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DAZ2_BIFLN
L3_105_245G1_scaffold_1651_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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7747..9159
DNA (1413bp) protein (471aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
DNA gyrase subunit B n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX58_BIFLJ
gyrB; DNA gyrase subunit B
L3_105_245G1_scaffold_1651_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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9227..9667
DNA (441bp) protein (147aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
DNA gyrase subunit A n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX59_BIFLJ
DNA gyrase subunit A
Displaying 10 items

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