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L3_105_245G1_scaffold_1664

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_1664_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..189
DNA (189bp) protein (63aa)
Putative transport protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNL3_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ53369.1}; Flags: Precursor;; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_105_245G1_scaffold_1664_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(171..1199)
DNA (1029bp) protein (343aa)
Putative transcriptional regulator n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=E8MNU5_BIFLS
putative transcriptional regulator
HTH-type transcriptional regulator DegA {ECO:0000313|EMBL:CEF16333.1}; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
L3_105_245G1_scaffold_1664_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1379..2662
DNA (1284bp) protein (428aa)
Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNL1_BIFLS
mandelate racemase/muconate lactonizing protein
Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein {ECO:0000313|EMBL:ACJ53367.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_105_245G1_scaffold_1664_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2803..3594
DNA (792bp) protein (264aa)
Dehydrogenase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNL0_BIFLS
dehydrogenase
Short-chain dehydrogenase {ECO:0000313|EMBL:KEY30747.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
L3_105_245G1_scaffold_1664_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3824..5107
DNA (1284bp) protein (428aa)
Major facilitator superfamily MFS_1 n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNK9_BIFLS
putative fucose transport protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACJ53365.1}; Flags: Precursor;; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_105_245G1_scaffold_1664_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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5109..5876
DNA (768bp) protein (256aa)
Amidohydrolase 2 n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNK8_BIFLS
putative amidohydrolase
Amidohydrolase 2 {ECO:0000313|EMBL:ACJ53364.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_105_245G1_scaffold_1664_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6122..6568)
DNA (447bp) protein (149aa)
Putative fucose transport protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GNK7_BIFLS
putative fucose transport protein
RbsD or FucU transport {ECO:0000313|EMBL:ACJ53363.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_105_245G1_scaffold_1664_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6820..7737)
DNA (918bp) protein (306aa)
Hypothetical permease n=2 Tax=Bifidobacterium longum RepID=B3DPJ9_BIFLD
Membrane protein {ECO:0000313|EMBL:KEY30751.1}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
permease
L3_105_245G1_scaffold_1664_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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7796..9070
DNA (1275bp) protein (425aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:CEF15823.1}; EC=3.5.1.18 {ECO:0000313|EMBL:CEF15823.1};; TaxID=1682 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis.;"
Dipeptidase n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=E8MNT8_BIFLS
dipeptidase
L3_105_245G1_scaffold_1664_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(9454..10422)
DNA (969bp) protein (323aa)
Putative Tat pathway signal sequence n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3KZ97_BIFBR
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EFE88444.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Displaying 10 items

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