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L3_105_357G1_scaffold_44

Search features with annotation key words

Displaying items 1-30 of 123 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_357G1_scaffold_44_1
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

219..389
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7D983_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD87189.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
hypothetical protein
L3_105_357G1_scaffold_44_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(525..1547)
DNA (1023bp) protein (341aa)
Mu transposase, C-terminal./Integrase core domain n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L0R3_9FIRM
Mu transposase, C-terminal./Integrase core domain.
Mu transposase, C-terminal./Integrase core domain {ECO:0000313|EMBL:CBL13203.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_105_357G1_scaffold_44_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1622..2119)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLU4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82995.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_105_357G1_scaffold_44_4
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2295..3023)
DNA (729bp) protein (243aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2XYI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG89997.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
DNA repair proteins
L3_105_357G1_scaffold_44_5
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3196..3648
DNA (453bp) protein (151aa)
RNA-directed DNA polymerase (Reverse transcriptase) n=1 Tax=Pelosinus fermentans JBW45 RepID=I8TZA9_9FIRM
RNA-directed DNA polymerase (Reverse transcriptase)
RNA-directed DNA polymerase (Reverse transcriptase) {ECO:0000313|EMBL:AJQ26344.1}; TaxID=1192197 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans JBW45.;"
L3_105_357G1_scaffold_44_6
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4442..6217
DNA (1776bp) protein (592aa)
Reverse transcriptase (RNA-dependent DNA polymerase) n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ER86_9FIRM
Reverse transcriptase (RNA-dependent DNA polymerase) {ECO:0000313|EMBL:EEQ60530.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
group II intron reverse transcriptase maturase
L3_105_357G1_scaffold_44_7
Lachnospiraceae oral taxon 107, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7289..7693
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae oral taxon 107 str. F0167 RepID=F3B7S0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85790.1}; TaxID=575593 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae oral taxon 107 str. F0167.;"
IS200/IS605 family transposase
L3_105_357G1_scaffold_44_8
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8136..8411)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZS96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM87693.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
hypothetical protein
L3_105_357G1_scaffold_44_9
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8990..9883)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Bacillus cereus VD200 RepID=J8KA68_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EJS02235.1}; TaxID=1053244 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VD200.;"
hypothetical protein
L3_105_357G1_scaffold_44_10
unknown

Not on your lists

comp(10294..10806)
DNA (513bp) protein (171aa)

This feature has no annotations

L3_105_357G1_scaffold_44_11
unknown

Not on your lists

comp(11452..11571)
DNA (120bp) protein (40aa)

This feature has no annotations

L3_105_357G1_scaffold_44_12
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11588..13213)
DNA (1626bp) protein (542aa)
Uncharacterized protein n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L949_BLAHA
Transposase, IS204/IS1001/IS1096/IS1165 {ECO:0000313|EMBL:KJR45264.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
transposase IS204/IS1001/IS1096/IS1165 family protein
L3_105_357G1_scaffold_44_13
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14009..15292
DNA (1284bp) protein (428aa)
Putative uncharacterized protein n=5 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WXF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX77576.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Retron-type reverse transcriptase
L3_105_357G1_scaffold_44_14
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15667..18177)
DNA (2511bp) protein (837aa)
Efflux ABC transporter, permease protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTG2_9CLOT
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EEA80685.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
efflux ABC transporter permease
L3_105_357G1_scaffold_44_15
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18183..18857)
DNA (675bp) protein (225aa)
ABC transporter ATP-binding protein (EC:3.6.3.-)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IZH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS24312.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
L3_105_357G1_scaffold_44_16
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18879..19079)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTG4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80687.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_105_357G1_scaffold_44_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19096..20175)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTG5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80688.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_105_357G1_scaffold_44_18
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20192..21343)
DNA (1152bp) protein (384aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTG6_9CLOT
L3_105_357G1_scaffold_44_19
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21479..21649)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTG7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80690.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_105_357G1_scaffold_44_20
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21627..22919)
DNA (1293bp) protein (431aa)
two-component signal transduction sensor histidine kinase (EC:2.7.13.3)
Sensor histidine kinase VirS domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTG8_9CLOT
Sensor histidine kinase VirS domain protein {ECO:0000313|EMBL:EEA80691.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_105_357G1_scaffold_44_21
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22916..23626)
DNA (711bp) protein (237aa)
LytTr DNA-binding domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTG9_9CLOT
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EEA80692.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_105_357G1_scaffold_44_22
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23651..24253)
DNA (603bp) protein (201aa)
Accessory protein regulator protein B n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTH0_9CLOT
Accessory protein regulator protein B {ECO:0000313|EMBL:EEA80693.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
accessory gene regulator
L3_105_357G1_scaffold_44_23
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24439..24900)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTH5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80664.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_105_357G1_scaffold_44_24
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24930..26216)
DNA (1287bp) protein (429aa)
Radical SAM additional 4Fe4S-binding SPASM domain-containing protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IRA1_9FIRM
Radical SAM additional 4Fe4S-binding SPASM domain-containing protein {ECO:0000313|EMBL:EOS24321.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
molybdenum cofactor biosynthesis protein MoeA
L3_105_357G1_scaffold_44_25
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26233..27321)
DNA (1089bp) protein (363aa)
Radical SAM additional 4Fe4S-binding SPASM domain-containing protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IZH7_9FIRM
Radical SAM additional 4Fe4S-binding SPASM domain-containing protein {ECO:0000313|EMBL:EOS24322.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L3_105_357G1_scaffold_44_26
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27477..29609)
DNA (2133bp) protein (711aa)
Efflux ABC transporter, permease protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTH8_9CLOT
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EEA80667.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
ABC-type transport system, permease
L3_105_357G1_scaffold_44_27
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29581..30339)
DNA (759bp) protein (253aa)
ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium nexile DSM 1787 RepID=B6FVI2_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEA79957.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_105_357G1_scaffold_44_28
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30355..32028)
DNA (1674bp) protein (558aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IR15_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS24325.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
putative ABC transporter ATP-binding protein/permease
L3_105_357G1_scaffold_44_29
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32047..33204)
DNA (1158bp) protein (386aa)
Radical SAM domain protein n=2 Tax=Clostridium nexile DSM 1787 RepID=B6FTI1_9CLOT
Radical SAM domain protein {ECO:0000313|EMBL:EEA80640.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Radical SAM domain protein
L3_105_357G1_scaffold_44_30
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33422..33592)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IQZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS24329.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
Displaying items 1-30 of 123 in total

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