ggKbase home page

L3_105_357G1_scaffold_132

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_357G1_scaffold_132_1
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39..302)
DNA (264bp) protein (88aa)
Toxin-antitoxin system, toxin component, Fic domain protein n=2 Tax=Parabacteroides RepID=E1YSA0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25819.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
death-on-curing family protein
L3_105_357G1_scaffold_132_2
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

398..1804
DNA (1407bp) protein (469aa)
Efflux transporter, outer membrane factor lipoprotein, NodT family n=2 Tax=Parabacteroides RepID=E1YS99_9PORP
Efflux transporter, outer membrane factor lipoprotein, NodT family {ECO:0000313|EMBL:EFK63430.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
outer membrane efflux protein oprM
L3_105_357G1_scaffold_132_3
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1874..2989
DNA (1116bp) protein (372aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TJ32_9BACE
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EEY81728.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
cation efflux pump
L3_105_357G1_scaffold_132_4
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2997..6134
DNA (3138bp) protein (1046aa)
Multidrug efflux pump BpeF n=5 Tax=Bacteroidales RepID=C7X8S3_9PORP
cation efflux pump
Multidrug efflux pump BpeF {ECO:0000313|EMBL:EEU51602.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_105_357G1_scaffold_132_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6243..6644)
DNA (402bp) protein (134aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TJ30_9BACE
peptidyl-prolyl cis-trans isomerase
L3_105_357G1_scaffold_132_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6754..6966
DNA (213bp) protein (71aa)
Uncharacterized protein n=5 Tax=Parabacteroides RepID=C7X8S1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25814.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_105_357G1_scaffold_132_7
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7633..9099
DNA (1467bp) protein (489aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
Catalase n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LCS3_PARD8
catalase
L3_105_357G1_scaffold_132_8
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9171..9545)
DNA (375bp) protein (125aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=A6LCS4_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK63425.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_105_357G1_scaffold_132_9
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9545..10519)
DNA (975bp) protein (325aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=3 Tax=Bacteroidales RepID=D0TJ26_9BACE
L3_105_357G1_scaffold_132_10
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10550..12334)
DNA (1785bp) protein (595aa)
Chloride transporter, ClC family n=7 Tax=Bacteroidales RepID=C7X8R7_9PORP
Chloride transporter, ClC family {ECO:0000313|EMBL:EEY81721.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
chloride channel protein
L3_105_357G1_scaffold_132_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12336..13736)
DNA (1401bp) protein (467aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=2 Tax=Parabacteroides RepID=E1YS91_9PORP
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:EKN25808.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
glycosyltransferase
L3_105_357G1_scaffold_132_12
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13739..14299)
DNA (561bp) protein (187aa)
Sua5/YciO/YrdC/YwlC family protein n=3 Tax=Bacteroidales RepID=D0TJ23_9BACE
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:EFK63421.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
translation factor
L3_105_357G1_scaffold_132_13
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14523..16247
DNA (1725bp) protein (575aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EEY81718.1}; EC=3.1.-.- {ECO:0000313|EMBL:EEY81718.1};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Single-stranded-DNA-specific exonuclease RecJ n=3 Tax=Bacteroidales RepID=D0TJ22_9BACE
single-stranded-DNA-specific exonuclease RecJ
L3_105_357G1_scaffold_132_14
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16368..18173
DNA (1806bp) protein (602aa)
ATP-dependent DNA helicase RecQ n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6JIQ9_9PORP
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:CDB49972.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
ATP-dependent DNA helicase RecQ
L3_105_357G1_scaffold_132_15
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18271..19182)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6BAQ0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN32950.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_105_357G1_scaffold_132_16
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19223..20080)
DNA (858bp) protein (286aa)
ROK family protein n=2 Tax=Parabacteroides RepID=C7X8R1_9PORP
ROK family protein {ECO:0000313|EMBL:KDS59822.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
transcriptional regulator
L3_105_357G1_scaffold_132_17
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20325..22055)
DNA (1731bp) protein (577aa)
AspT/YidE/YbjL antiporter duplication domain-containing protein n=3 Tax=Bacteroidales RepID=K5ZG22_9PORP
AspT/YidE/YbjL antiporter duplication domain-containing protein {ECO:0000313|EMBL:EKN25802.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_105_357G1_scaffold_132_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22110..22919
DNA (810bp) protein (270aa)
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type n=2 Tax=Parabacteroides RepID=E1YS84_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25801.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
cyclophilin type peptidyl-prolyl cis-trans isomerase
L3_105_357G1_scaffold_132_19
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22932..23321
DNA (390bp) protein (130aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=E1YS83_9PORP
Putative uncharacterized protein {ECO:0000313|EMBL:EFI09162.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_105_357G1_scaffold_132_20
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23315..24436)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=K6BAP5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN32945.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
glycoside hydrolase family protein
L3_105_357G1_scaffold_132_21
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24454..26058)
DNA (1605bp) protein (535aa)
NAD-utilizing dehydrogenase n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LCT6_PARD8
NAD-utilizing dehydrogenase {ECO:0000313|EMBL:ABR43500.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
NAD-utilizing dehydrogenase
L3_105_357G1_scaffold_132_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26072..27442)
DNA (1371bp) protein (457aa)
DNA repair protein radA n=4 Tax=Bacteroidales RepID=D0TJ13_9BACE
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
DNA repair protein RadA
L3_105_357G1_scaffold_132_23
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27476..28474)
DNA (999bp) protein (333aa)
Asparaginase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IP20_9BACE
Asparaginase family protein {ECO:0000313|EMBL:KDS59801.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
asparaginase
L3_105_357G1_scaffold_132_24
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28608..28742
DNA (135bp) protein (45aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=K6AQE8_9PORP
Putative membrane protein {ECO:0000313|EMBL:KDS59715.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_105_357G1_scaffold_132_25
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28803..31109)
DNA (2307bp) protein (769aa)
Glycoside hydrolase family 92 n=2 Tax=Bacteroidales RepID=A6LCT9_PARD8
glycoside hydrolase
Alpha-1,2-mannosidase family protein {ECO:0000313|EMBL:EFI09157.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_105_357G1_scaffold_132_26
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31228..32100
DNA (873bp) protein (291aa)
Arginase family protein n=4 Tax=Bacteroidales RepID=C7X8Q2_9PORP
Arginase family protein {ECO:0000313|EMBL:KDS59797.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
arginase
L3_105_357G1_scaffold_132_27
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32169..32981)
DNA (813bp) protein (271aa)
Sec-independent protein translocase protein TatC n=2 Tax=Parabacteroides RepID=E1YS74_9PORP
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Sec-independent protein translocase
L3_105_357G1_scaffold_132_28
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33003..33197)
DNA (195bp) protein (65aa)
Sec-independent protein translocase protein TatA n=9 Tax=Bacteroidales RepID=A6LCU2_PARD8
Sec-independent protein translocase
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_105_357G1_scaffold_132_29
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33234..33332
DNA (99bp) protein (33aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_105_357G1_scaffold_132_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33337..34218
DNA (882bp) protein (294aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
Malonyl CoA-acyl carrier protein transacylase n=3 Tax=Bacteroidales RepID=D0TJ05_9BACE
malonyl CoA-acyl carrier protein transacylase
Displaying items 1-30 of 58 in total

View Taxonomy