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L3_105_357G1_scaffold_251

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_357G1_scaffold_251_1
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

260..532
DNA (273bp) protein (91aa)
DNA-binding protein HU-beta n=9 Tax=Bacteroidales RepID=A6LHY6_PARD8
DNA-binding protein HU-beta
Uncharacterized protein {ECO:0000313|EMBL:EKN21594.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_105_357G1_scaffold_251_2
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


635..2428
DNA (1794bp) protein (598aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IJ58_9PORP
L3_105_357G1_scaffold_251_3
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2438..3316
DNA (879bp) protein (293aa)
Uncharacterized protein n=5 Tax=Parabacteroides RepID=A6LHY4_PARD8
hypothetical protein
Rubrerythrin {ECO:0000313|EMBL:EFK64311.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_105_357G1_scaffold_251_4
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3394..5814)
DNA (2421bp) protein (807aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
DNA topoisomerase 1 n=4 Tax=Bacteroidales RepID=K6AC25_9PORP
DNA topoisomerase I
L3_105_357G1_scaffold_251_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5904..6167
DNA (264bp) protein (88aa)
Uncharacterized protein n=10 Tax=root RepID=A6LHY2_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR45296.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_105_357G1_scaffold_251_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6565..7728)
DNA (1164bp) protein (388aa)
Two-componnent system response regulator n=5 Tax=Parabacteroides RepID=A6LHY0_PARD8
two-componnent system response regulator
Uncharacterized protein {ECO:0000313|EMBL:EKN21589.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_105_357G1_scaffold_251_7
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7740..8591)
DNA (852bp) protein (284aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Two-component system sensor histidine kinase n=5 Tax=Bacteroidales RepID=A6LHX9_PARD8
two-component system sensor histidine kinase
L3_105_357G1_scaffold_251_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8594..9724)
DNA (1131bp) protein (377aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Two-component system sensor histidine kinase n=3 Tax=Bacteroidales RepID=A6LHX8_PARD8
two-component system sensor histidine kinase
L3_105_357G1_scaffold_251_9
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9740..10840)
DNA (1101bp) protein (367aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
Two-component system histidine kinase n=2 Tax=Bacteroidales RepID=D7IMI4_9BACE
two-component system sensor histidine kinase
L3_105_357G1_scaffold_251_10
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10858..12666)
DNA (1809bp) protein (603aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YPQ5_9PORP
Putative tonB-dependent receptor {ECO:0000313|EMBL:KDS43116.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
TonB-dependent receptor
L3_105_357G1_scaffold_251_11
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12676..15675)
DNA (3000bp) protein (1000aa)
Tetratricopeptide repeat protein n=2 Tax=Bacteroidales RepID=C7X5R2_9PORP
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EEU53232.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_105_357G1_scaffold_251_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15922..16440)
DNA (519bp) protein (173aa)
Putative mutT family protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LHX4_PARD8
mutT family protein
Putative mutT family protein {ECO:0000313|EMBL:ABR45288.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_105_357G1_scaffold_251_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16544..17530)
DNA (987bp) protein (329aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6AC33_9PORP
transcriptional repressor
Glucokinase family protein {ECO:0000313|EMBL:KDS71379.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_105_357G1_scaffold_251_14
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17699..18076)
DNA (378bp) protein (126aa)
Lactoylglutathione lyase n=6 Tax=Bacteroidales RepID=A6LHX2_PARD8
lactoylglutathione lyase
Glyoxalase family protein {ECO:0000313|EMBL:EEU53229.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_105_357G1_scaffold_251_15
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18124..18846)
DNA (723bp) protein (241aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5Z310_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB49321.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
metal dependent hydrolase
L3_105_357G1_scaffold_251_16
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18973..20847)
DNA (1875bp) protein (625aa)
RagB/SusD domain-containing protein n=4 Tax=Bacteroidales RepID=D7IMH7_9BACE
RagB/SusD domain-containing protein {ECO:0000313|EMBL:EFI10554.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_105_357G1_scaffold_251_17
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20884..24267)
DNA (3384bp) protein (1128aa)
Outer membrane protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IMH6_9BACE
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:KDS71375.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_105_357G1_scaffold_251_18
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24524..27928
DNA (3405bp) protein (1135aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TDI6_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EEY83361.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_105_357G1_scaffold_251_19
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27976..29829
DNA (1854bp) protein (618aa)
SusD family protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TDI7_9BACE
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:KDS43107.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
hypothetical protein
L3_105_357G1_scaffold_251_20
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29947..31722
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TDI8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY83363.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
transmembrane protein
L3_105_357G1_scaffold_251_21
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31732..33201
DNA (1470bp) protein (490aa)
WD40-like protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TDI9_9BACE
WD40-like protein {ECO:0000313|EMBL:EEY83364.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_105_357G1_scaffold_251_22
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33238..35010
DNA (1773bp) protein (591aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TDJ0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY83365.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_105_357G1_scaffold_251_23
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35018..36496
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6ID42_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB47130.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_105_357G1_scaffold_251_24
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36851..38032)
DNA (1182bp) protein (394aa)
Phosphoribosylglycinamide formyltransferase 2 {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083136}; Short=GART 2 {ECO:0000256|HAMAP-Rule:MF_01643};; EC=2.1.2.- {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083135};; 5'-phosphoribosylglycinamide transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; Formate-dependent GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01643}; GAR transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Phosphoribosylglycinamide formyltransferase 2 n=2 Tax=Parabacteroides RepID=C7X5P9_9PORP
phosphoribosylglycinamide formyltransferase
L3_105_357G1_scaffold_251_25
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38464..39147
DNA (684bp) protein (228aa)
ABC transporter, ATP-binding protein n=3 Tax=Bacteroidales RepID=D7IMG8_9BACE
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEJ85178.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_105_357G1_scaffold_251_26
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39140..40417
DNA (1278bp) protein (426aa)
Efflux ABC transporter, permease protein n=5 Tax=Bacteroidales RepID=C7X5P7_9PORP
ABC transporter permease
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EEU53217.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_105_357G1_scaffold_251_27
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40429..41685
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K5ZZE7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN27458.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
efflux ABC transporter permease
L3_105_357G1_scaffold_251_28
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41721..42842
DNA (1122bp) protein (374aa)
Membrane fusion efflux protein n=4 Tax=Bacteroidales RepID=A6LHV7_PARD8
membrane fusion efflux protein
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EEU53215.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_105_357G1_scaffold_251_29
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42855..44213
DNA (1359bp) protein (453aa)
Outer membrane efflux protein n=6 Tax=Bacteroidales RepID=C7X5P4_9PORP
outer membrane transport/efflux protein
Outer membrane channel protein {ECO:0000313|EMBL:KEJ85173.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
L3_105_357G1_scaffold_251_30
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(44357..44539)
DNA (183bp) protein (61aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5Z322_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ85172.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
Displaying items 1-30 of 62 in total

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