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L3_105_357G1_scaffold_319

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_357G1_scaffold_319_1
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..2856
DNA (2856bp) protein (952aa)
Putative outer membrane protein probably involved in nutrient binding n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IHZ2_9PORP
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:KDS53594.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
hypothetical protein
L3_105_357G1_scaffold_319_2
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2875..4431
DNA (1557bp) protein (519aa)
SusD family protein n=4 Tax=Bacteroidales RepID=D0TDA3_9BACE
SusD family protein {ECO:0000313|EMBL:EFK64374.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
SusD family protein
L3_105_357G1_scaffold_319_3
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4506..4916
DNA (411bp) protein (137aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=C7X5Z9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU53319.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_105_357G1_scaffold_319_4
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5209..7209)
DNA (2001bp) protein (667aa)
Fructose-1,6-bisphosphatase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; Short=FBPase class 3 {ECO:0000256|HAMAP-Rule:MF_01854};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01854};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Fructose-1,6-bisphosphatase class 3 n=5 Tax=Bacteroidales RepID=F16PC_PARD8
fructose-1,6-bisphosphatase
L3_105_357G1_scaffold_319_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7248..8555)
DNA (1308bp) protein (436aa)
Cytochrome c binding protein n=2 Tax=Bacteroidales RepID=D7IMR9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN21066.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
hypothetical protein
L3_105_357G1_scaffold_319_6
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8561..8767)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LI51_PARD8
hypothetical protein
Cytochrome c binding protein {ECO:0000313|EMBL:EFI10646.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_105_357G1_scaffold_319_7
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8770..10524)
DNA (1755bp) protein (585aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IMR8_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI10645.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_105_357G1_scaffold_319_8
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10681..13155)
DNA (2475bp) protein (825aa)
Putative TonB-dependent receptor exported protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6JFE5_9PORP
Putative TonB-dependent receptor exported protein {ECO:0000313|EMBL:CDB48902.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
TonB-dependent receptor
L3_105_357G1_scaffold_319_9
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13403..14044
DNA (642bp) protein (214aa)
Putative SagB-type dehydrogenase domain protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IF14_9PORP
Putative SagB-type dehydrogenase domain protein {ECO:0000313|EMBL:CDB48903.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_105_357G1_scaffold_319_10
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14147..14365)
DNA (219bp) protein (73aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=E1YPW7_9PORP
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDB48904.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
ABC transporter ATP-binding protein
L3_105_357G1_scaffold_319_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15253..16434
DNA (1182bp) protein (394aa)
Ser/Thr phosphatase family protein n=2 Tax=Parabacteroides RepID=E1YPW5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN21497.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_105_357G1_scaffold_319_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16437..17615
DNA (1179bp) protein (393aa)
Uncharacterized protein n=2 Tax=Parabacteroides distasonis RepID=K6ABI8_9PORP
phosphoesterase
Putative phosphoesterase {ECO:0000313|EMBL:ABR45353.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_105_357G1_scaffold_319_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17686..19392)
DNA (1707bp) protein (569aa)
C-terminal processing peptidase family protein {ECO:0000313|EMBL:KDS53596.1}; EC=3.4.21.- {ECO:0000313|EMBL:KDS53596.1};; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
Carboxy-terminal processing protease n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6JFF0_9PORP
carboxy-terminal processing protease
L3_105_357G1_scaffold_319_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19441..20418)
DNA (978bp) protein (326aa)
Kinase, PfkB family n=1 Tax=Parabacteroides sp. D13 RepID=C7X5Y1_9PORP
PfkB carbohydrate kinase family protein {ECO:0000313|EMBL:KDS71454.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
PfkB family carbohydrate kinase
L3_105_357G1_scaffold_319_15
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20928..22826)
DNA (1899bp) protein (633aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X5Y0_9PORP
Glycosyltransferase family 2 {ECO:0000313|EMBL:CDB48909.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
glycosyl transferase family protein
L3_105_357G1_scaffold_319_16
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22972..23730
DNA (759bp) protein (253aa)
trmB; tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
tRNA (guanine-N(7)-)-methyltransferase n=2 Tax=Parabacteroides RepID=A6LI35_PARD8
L3_105_357G1_scaffold_319_17
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23758..24867
DNA (1110bp) protein (370aa)
Mrp/Nbp35 family ATP-binding protein n=8 Tax=Bacteroidales RepID=A6LI34_PARD8
Mrp/Nbp35 family ATP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EKN21703.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_105_357G1_scaffold_319_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24985..26139)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6LI33_PARD8
hypothetical protein
Acyltransferase family protein {ECO:0000313|EMBL:KDS52623.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
L3_105_357G1_scaffold_319_19
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26239..27735)
DNA (1497bp) protein (499aa)
Histidine ammonia-lyase {ECO:0000256|RuleBase:RU004479, ECO:0000256|SAAS:SAAS00083026}; EC=4.3.1.3 {ECO:0000256|RuleBase:RU004479, ECO:0000256|SAAS:SAAS00083026};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Histidine ammonia-lyase n=3 Tax=Bacteroidales RepID=C7X5X5_9PORP
histidine ammonia-lyase
L3_105_357G1_scaffold_319_20
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27739..28362)
DNA (624bp) protein (208aa)
Methenyltetrahydrofolate cyclohydrolase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IMP7_9BACE
Methenyltetrahydrofolate cyclohydrolase {ECO:0000313|EMBL:EFI10624.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
formiminotransferase-cyclodeaminase
L3_105_357G1_scaffold_319_21
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28398..29648)
DNA (1251bp) protein (417aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
Imidazolonepropionase n=6 Tax=Bacteroidales RepID=HUTI_PARD8
imidazolonepropionase
L3_105_357G1_scaffold_319_22
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29652..30557)
DNA (906bp) protein (302aa)
Glutamate formimidoyltransferase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IMP5_9BACE
Glutamate formimidoyltransferase {ECO:0000313|EMBL:EFI10622.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
formiminotransferase-cyclodeaminase
L3_105_357G1_scaffold_319_23
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30554..32557)
DNA (2004bp) protein (668aa)
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
Urocanate hydratase n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LI28_PARD8
L3_105_357G1_scaffold_319_24
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32994..33404)
DNA (411bp) protein (137aa)
PIN domain protein n=5 Tax=Bacteroidales RepID=C7X5X0_9PORP
DNA binding protein
PIN domain protein {ECO:0000313|EMBL:EEU53290.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_105_357G1_scaffold_319_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33401..33643)
DNA (243bp) protein (81aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6LI26_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS71441.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_105_357G1_scaffold_319_26
unknown

Not on your lists

33954..34148
DNA (195bp) protein (65aa)

This feature has no annotations

L3_105_357G1_scaffold_319_27
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34054..35298)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6AWE2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN27930.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
aminotransferase
L3_105_357G1_scaffold_319_28
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35312..35992)
DNA (681bp) protein (227aa)
Uncharacterized protein n=2 Tax=Parabacteroides sp. D25 RepID=K6BP78_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN29953.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
lmbe family protein
L3_105_357G1_scaffold_319_29
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35982..36977)
DNA (996bp) protein (332aa)
Methionyl-tRNA formyltransferase {ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|SAAS:SAAS00150580};; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Formyl transferase domain protein n=3 Tax=Bacteroidales RepID=D0TG67_9BACE
formyl transferase domain-containing protein
L3_105_357G1_scaffold_319_30
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36974..37549)
DNA (576bp) protein (192aa)
Putative undecaprenyl-phosphate galactose phosphotransferase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TG68_9BACE
Putative undecaprenyl-phosphate galactose phosphotransferase {ECO:0000313|EMBL:EEY82122.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
Displaying items 1-30 of 59 in total

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