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L3_105_357G1_scaffold_329

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_357G1_scaffold_329_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(410..1336)
DNA (927bp) protein (309aa)
serine O-acetyltransferase (EC:2.3.1.30)
Serine O-acetyltransferase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD83_9FIRM
Serine O-acetyltransferase {ECO:0000313|EMBL:EES77132.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_105_357G1_scaffold_329_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1998..4106)
DNA (2109bp) protein (703aa)
Polyphosphate kinase {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191}; EC=2.7.4.1 {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Polyphosphate kinase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD96_9FIRM
polyphosphate kinase
L3_105_357G1_scaffold_329_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4358..5317)
DNA (960bp) protein (320aa)
Cation diffusion facilitator family transporter n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JD97_9FIRM
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EES77146.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
cation diffusion facilitator family transporter
L3_105_357G1_scaffold_329_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5894..7303)
DNA (1410bp) protein (470aa)
MATE efflux family protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5M073_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EQM98715.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative efflux protein, MATE family
L3_105_357G1_scaffold_329_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7803..8663)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77151.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
sugar ABC transporter permease
L3_105_357G1_scaffold_329_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8663..9847)
DNA (1185bp) protein (395aa)
Binding-protein-dependent transport system inner membrane component n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CG82_9FIRM
Binding-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:CDD77076.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
sugar ABC transporter permease
L3_105_357G1_scaffold_329_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9873..11153)
DNA (1281bp) protein (427aa)
Extracellular solute-binding protein family 1 n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CH48_9FIRM
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CDD77077.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_105_357G1_scaffold_329_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11549..12163)
DNA (615bp) protein (205aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JDA5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77154.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_105_357G1_scaffold_329_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12414..13586)
DNA (1173bp) protein (391aa)
Malic enzyme (EC:1.1.1.38)
Malic enzyme n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFS1_9FIRM
Malic enzyme {ECO:0000313|EMBL:CDD77079.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_105_357G1_scaffold_329_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13785..15524)
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CGI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77080.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_105_357G1_scaffold_329_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15585..16181)
DNA (597bp) protein (199aa)
RNA polymerase sigma-70 factor n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CG85_9FIRM
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CDD77081.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
RNA polymerase sigma factor, sigma-70 family
L3_105_357G1_scaffold_329_12
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16501..17007)
DNA (507bp) protein (169aa)
phosphohydrolase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002D43F4E
Uncharacterized protein {ECO:0000313|EMBL:EES77159.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
HD domain.
L3_105_357G1_scaffold_329_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17128..18285)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79758.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Uncharacterized flavoproteins
L3_105_357G1_scaffold_329_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18463..19494)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDB2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77161.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_105_357G1_scaffold_329_15
[Eubacterium] eligens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19820..21586)
DNA (1767bp) protein (589aa)
ATP-binding cassette, subfamily C, bacterial n=1 Tax=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) RepID=C4Z7V7_EUBE2
ATP-binding cassette subfamily C protein
ATP-binding cassette, subfamily C, bacterial {ECO:0000313|EMBL:ACR73385.1}; TaxID=515620 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium eligens (strain ATCC 27750 / VPI C15-48).;"
L3_105_357G1_scaffold_329_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21579..23321)
DNA (1743bp) protein (581aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5LYH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQM98716.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components
L3_105_357G1_scaffold_329_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23318..23659)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5LVZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQM98717.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Nitrous oxide-stimulated promoter.
L3_105_357G1_scaffold_329_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23661..24056)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDC1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77170.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_105_357G1_scaffold_329_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24265..25131)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77171.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_105_357G1_scaffold_329_20
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25137..26024)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77172.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Mn-dependent transcriptional regulator
L3_105_357G1_scaffold_329_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26175..26609)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79760.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_105_357G1_scaffold_329_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26600..26953)
DNA (354bp) protein (118aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JDB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79762.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Nucleotidyltransferase domain.
L3_105_357G1_scaffold_329_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27111..27977)
DNA (867bp) protein (289aa)
Protein HflC n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JDB5_9FIRM
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_105_357G1_scaffold_329_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28065..29087)
DNA (1023bp) protein (341aa)
membrane protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003117F8B
HflK protein {ECO:0000313|EMBL:EES77165.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
HflK protein
L3_105_357G1_scaffold_329_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29380..30207)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79770.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
xylose isomerase
L3_105_357G1_scaffold_329_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30217..30777)
DNA (561bp) protein (187aa)
3-hexulose-6-phosphate isomerase (EC:5.3.1.27)
3-hexulose-6-phosphate isomerase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQ59_9FIRM
3-hexulose-6-phosphate isomerase {ECO:0000313|EMBL:CDD79772.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_105_357G1_scaffold_329_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30810..31796)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79773.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
inner-membrane translocator
L3_105_357G1_scaffold_329_28
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31802..33295)
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79774.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC transporter related protein
L3_105_357G1_scaffold_329_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33383..34333)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79775.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
periplasmic binding protein/LacI transcriptional regulator
L3_105_357G1_scaffold_329_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34376..35896)
DNA (1521bp) protein (507aa)
Xylulokinase n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPC0_9FIRM
Xylulokinase {ECO:0000313|EMBL:CDD79776.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
xylulokinase
Displaying items 1-30 of 34 in total

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