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L3_105_357G1_scaffold_345

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_357G1_scaffold_345_1
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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683..1732
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J6B6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44556.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
rod shape-determining protein MreB
L3_105_357G1_scaffold_345_2
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1861..4155
DNA (2295bp) protein (765aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
helicase, putative, RecD/TraA family (EC:3.1.11.5)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8S472_9CLOT
L3_105_357G1_scaffold_345_3
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4143..4877
DNA (735bp) protein (245aa)
ComF family protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EW08_9FIRM
ComF family protein {ECO:0000313|EMBL:EEQ62066.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
phosphoribosyltransferase
L3_105_357G1_scaffold_345_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5203..5457
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J6B2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44551.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Preprotein translocase subunit SecE
L3_105_357G1_scaffold_345_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5479..5994
DNA (516bp) protein (172aa)
Transcription termination/antitermination protein NusG n=1 Tax=Clostridium sp. CAG:7 RepID=R5IR28_9CLOT
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
NusG antitermination factor
L3_105_357G1_scaffold_345_6
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6096..6521
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=8 Tax=Clostridium RepID=A8S467_9CLOT
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
50S ribosomal protein L11
L3_105_357G1_scaffold_345_7
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


6600..7295
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=16 Tax=Clostridium RepID=A8S466_9CLOT
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
ribosomal protein L1, bacterial/chloroplast
L3_105_357G1_scaffold_345_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7622..8122
DNA (501bp) protein (167aa)
50S ribosomal protein L10 n=1 Tax=Clostridium sp. CAG:7 RepID=R5J6P8_9CLOT
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
LSU ribosomal protein L10P
L3_105_357G1_scaffold_345_9
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8186..8560
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 n=1 Tax=Clostridium sp. CAG:58 RepID=R6RR50_9CLOT
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
LSU ribosomal protein L12P
L3_105_357G1_scaffold_345_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8664..9218)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YD63_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09848.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
cell wall binding repeat-containing protein
L3_105_357G1_scaffold_345_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9757..11499
DNA (1743bp) protein (581aa)
Cell wall binding repeat-containing protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9X3D9_9CLOT
Cell wall binding repeat-containing protein {ECO:0000313|EMBL:ENZ09846.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
cell wall binding repeat-containing protein
L3_105_357G1_scaffold_345_12
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11607..12743
DNA (1137bp) protein (379aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HRV0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE95817.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Choline binding protein PcpA
L3_105_357G1_scaffold_345_13
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12808..13281)
DNA (474bp) protein (158aa)
Archaeal ATPase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RHB3_9FIRM
Archaeal ATPase {ECO:0000313|EMBL:KJJ75296.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
ATPase
L3_105_357G1_scaffold_345_14
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13429..13938)
DNA (510bp) protein (170aa)
Transposase IS30 family n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9H1_9CLOT
Transposase, IS30 family {ECO:0000313|EMBL:EXG87039.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
transposase and inactivated derivatives IS30 family-like protein
L3_105_357G1_scaffold_345_15
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14203..15819
DNA (1617bp) protein (539aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RKT2_9CLOT
O-antigen ligase {ECO:0000313|EMBL:KJJ65593.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L3_105_357G1_scaffold_345_16
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16051..17403
DNA (1353bp) protein (451aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R4I8_CLOSW
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:ADL03172.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_105_357G1_scaffold_345_17
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17563..18393
DNA (831bp) protein (277aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEG56872.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEG56872.1};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVR1_9CLOT
Glycosyltransferases, probably involved in cell wall biogenesis
L3_105_357G1_scaffold_345_18
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18463..19497
DNA (1035bp) protein (345aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEQ62091.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEQ62091.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EW33_9FIRM
glycosyltransferase family 2 candidate b-glycosyltransferase
L3_105_357G1_scaffold_345_19
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19529..20317
DNA (789bp) protein (263aa)
ABC-2 type transporter n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVQ8_9CLOT
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
ABC-type polysaccharide/polyol phosphate export systems, permease component
L3_105_357G1_scaffold_345_20
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20328..21074
DNA (747bp) protein (249aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVQ7_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG56868.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
L3_105_357G1_scaffold_345_21
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21075..22235
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVQ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG56867.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L3_105_357G1_scaffold_345_22
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22232..23272
DNA (1041bp) protein (347aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
rmlB_1; dTDP-glucose 4,6-dehydratase, RmlB_1 (EC:4.2.1.46)
GDP-mannose 4,6-dehydratase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVQ5_9CLOT
L3_105_357G1_scaffold_345_23
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23275..24444
DNA (1170bp) protein (390aa)
DegT/DnrJ/EryC1/StrS aminotransferase family protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVQ4_9CLOT
DegT/DnrJ/EryC1/StrS aminotransferase family protein {ECO:0000313|EMBL:EEG56865.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
pyridoxamine 5-phosphate oxidase
L3_105_357G1_scaffold_345_24
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24425..25381
DNA (957bp) protein (319aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
GDP-L-fucose synthase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVQ3_9CLOT
nad-dependent epimerase/dehydratase
L3_105_357G1_scaffold_345_25
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25383..26204
DNA (822bp) protein (274aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVQ2_9CLOT
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EEG56863.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
aldo/keto reductase
L3_105_357G1_scaffold_345_26
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26234..28033
DNA (1800bp) protein (600aa)
Thiamine pyrophosphate enzyme, central domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVQ1_9CLOT
Thiamine pyrophosphate enzyme, central domain protein {ECO:0000313|EMBL:EEG56862.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
thiamine pyrophosphate protein central region
L3_105_357G1_scaffold_345_27
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28046..29260
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVP9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG56860.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L3_105_357G1_scaffold_345_28
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29284..30294
DNA (1011bp) protein (337aa)
HMGL-like protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVP8_9CLOT
HMGL-like protein {ECO:0000313|EMBL:EEG56859.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L3_105_357G1_scaffold_345_29
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30291..31091
DNA (801bp) protein (267aa)
Transketolase, thiamine diphosphate binding domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVP7_9CLOT
Transketolase, thiamine diphosphate binding domain protein {ECO:0000313|EMBL:EEG56858.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
transketolase
L3_105_357G1_scaffold_345_30
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31060..31602
DNA (543bp) protein (181aa)
Hydrolase, NUDIX family n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVP6_9CLOT
Hydrolase, NUDIX family {ECO:0000313|EMBL:EEG56857.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
NUDIX hydrolase
Displaying items 1-30 of 35 in total

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