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L3_105_357G1_scaffold_358

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_357G1_scaffold_358_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..692)
DNA (690bp) protein (230aa)
MATE efflux family protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAE3_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EES77580.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putative efflux protein, MATE family
L3_105_357G1_scaffold_358_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

875..1069
DNA (195bp) protein (65aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JAE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77581.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_105_357G1_scaffold_358_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1083..1454)
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JAE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77655.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_105_357G1_scaffold_358_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1471..2049)
DNA (579bp) protein (193aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JAE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77653.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_105_357G1_scaffold_358_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2058..2783)
DNA (726bp) protein (242aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=R7CHX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77651.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_105_357G1_scaffold_358_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3177..4040
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77586.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
beta-lactamase
L3_105_357G1_scaffold_358_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4270..5163
DNA (894bp) protein (298aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JAF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77647.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
putative hydrolase
L3_105_357G1_scaffold_358_8
unknown

Not on your lists

comp(4978..5340)
DNA (363bp) protein (121aa)

This feature has no annotations

L3_105_357G1_scaffold_358_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5422..5763)
DNA (342bp) protein (114aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JAF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77645.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_105_357G1_scaffold_358_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5742..6203)
DNA (462bp) protein (154aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JAF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77643.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Zn-finger in Ran binding protein and others.
L3_105_357G1_scaffold_358_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6307..7314)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JAF3_9FIRM
Exopolyphosphatase MgpA {ECO:0000313|EMBL:CDD77641.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Exopolyphosphatase-related proteins
L3_105_357G1_scaffold_358_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7819..10152)
DNA (2334bp) protein (778aa)
Ferrous iron transporter B n=2 Tax=Ruminococcus RepID=C6JAF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77639.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ferrous iron transporter FeoB
L3_105_357G1_scaffold_358_13
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10466..11125)
DNA (660bp) protein (220aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JAF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77592.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_105_357G1_scaffold_358_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11349..13403)
DNA (2055bp) protein (685aa)
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CI52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77635.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_105_357G1_scaffold_358_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13753..15453)
DNA (1701bp) protein (567aa)
DAK2 domain fusion protein YloV n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JAF7_9FIRM
DAK2 domain fusion protein YloV {ECO:0000313|EMBL:EES77594.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
DAK2 domain fusion protein YloV
L3_105_357G1_scaffold_358_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15446..15805)
DNA (360bp) protein (120aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JAF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77595.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_105_357G1_scaffold_358_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


16014..16202
DNA (189bp) protein (63aa)
50S ribosomal protein L28 n=2 Tax=Ruminococcus RepID=C6JAF9_9FIRM
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
LSU ribosomal protein L28P
L3_105_357G1_scaffold_358_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16536..16907)
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JAG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77631.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_105_357G1_scaffold_358_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16910..17917)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JAG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77630.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Protein of unknown function (DUF2953).
L3_105_357G1_scaffold_358_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17922..18233)
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JAG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77629.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_105_357G1_scaffold_358_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18338..18793)
DNA (456bp) protein (152aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JAG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77628.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ADP-ribose pyrophosphatase
L3_105_357G1_scaffold_358_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18974..20425)
DNA (1452bp) protein (484aa)
Penicillin-binding protein transpeptidase n=2 Tax=Ruminococcus RepID=R7CIQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQM98844.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Cell division protein FtsI/penicillin-binding protein 2
L3_105_357G1_scaffold_358_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20385..21758)
DNA (1374bp) protein (458aa)
Bacterial cell division membrane protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHU4_9FIRM
Bacterial cell division membrane protein {ECO:0000313|EMBL:CDD77626.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Bacterial cell division membrane protein
L3_105_357G1_scaffold_358_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21764..23959)
DNA (2196bp) protein (732aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CI40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77625.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
peptidase U32
L3_105_357G1_scaffold_358_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24088..24495)
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JAG8_9FIRM
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
cell division protein ZapA
L3_105_357G1_scaffold_358_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24630..25634)
DNA (1005bp) protein (335aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Holliday junction ATP-dependent DNA helicase RuvB n=2 Tax=Ruminococcus RepID=C6JAG9_9FIRM
Holliday junction DNA helicase, RuvB subunit
L3_105_357G1_scaffold_358_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25714..26322)
DNA (609bp) protein (203aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CIP9_9FIRM
Holliday junction DNA helicase subunit RuvA
L3_105_357G1_scaffold_358_28
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26457..27248)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77621.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
electron transport complex, RnfABCDGE type, B subunit
L3_105_357G1_scaffold_358_29
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27262..27837)
DNA (576bp) protein (192aa)
Electron transport complex, rnfabcdge type, A subunit n=2 Tax=Ruminococcus RepID=C6JAH2_9FIRM
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
electron transport complex, RnfABCDGE type, A subunit
L3_105_357G1_scaffold_358_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27844..28554)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CHC8_9FIRM
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
electron transport complex, RnfABCDGE type, E subunit
Displaying items 1-30 of 37 in total

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