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L3_105_357G1_scaffold_366

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_357G1_scaffold_366_1
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(193..585)
DNA (393bp) protein (131aa)
EAL domain-containing protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQL3_9FIRM
EAL domain-containing protein {ECO:0000313|EMBL:CDD80250.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
RNase II stability modulator
L3_105_357G1_scaffold_366_2
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1190..1588)
DNA (399bp) protein (133aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNB3_9FIRM
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein {ECO:0000313|EMBL:CDD78898.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
NapH; polyferredoxin
L3_105_357G1_scaffold_366_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1806..2390
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76352.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
cytidylate kinase
L3_105_357G1_scaffold_366_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2551..3027)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF06_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76353.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Acetyltransferases
L3_105_357G1_scaffold_366_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3070..4200)
DNA (1131bp) protein (377aa)
HipA domain-containing protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLJ8_9FIRM
HipA domain-containing protein {ECO:0000313|EMBL:CDD78891.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
HipA N-terminal domain
L3_105_357G1_scaffold_366_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4187..4465)
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JF08_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDD78890.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
transcriptional regulator
L3_105_357G1_scaffold_366_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4707..5285
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF09_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76356.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Transcriptional regulator
L3_105_357G1_scaffold_366_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5295..6839)
DNA (1545bp) protein (515aa)
Long-chain acyl-CoA synthetases (AMP-forming) (EC:6.2.1.3)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76357.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_105_357G1_scaffold_366_9
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6943..7173)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78884.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Acyl carrier protein
L3_105_357G1_scaffold_366_10
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7200..8588)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JF12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78883.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Condensation domain.
L3_105_357G1_scaffold_366_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8888..9874)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78881.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Prolyl oligopeptidase family.
L3_105_357G1_scaffold_366_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10000..13380)
DNA (3381bp) protein (1127aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKY2_9FIRM
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CDD78879.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
diguanylate cyclase (GGDEF) domain
L3_105_357G1_scaffold_366_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13643..13837)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78877.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ATPase components of various ABC-type transport systems, contain duplicated ATPase
L3_105_357G1_scaffold_366_14
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13916..14773)
DNA (858bp) protein (286aa)
Drug/metabolite transporter n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLI5_9FIRM
Drug/metabolite transporter {ECO:0000313|EMBL:CDD78876.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_105_357G1_scaffold_366_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14775..15401)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CLQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD78875.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_105_357G1_scaffold_366_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15836..17113)
DNA (1278bp) protein (426aa)
membrane protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002DCB73D
UPF0597 protein RSAG_02535 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
serine dehydratase subunit alpha
L3_105_357G1_scaffold_366_17
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17188..18531)
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 PF5_9FIRM">RepID=R7CPF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79577.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
putative efflux protein, MATE family
L3_105_357G1_scaffold_366_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18521..18973)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQ32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79578.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Transcriptional regulators
L3_105_357G1_scaffold_366_19
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19166..20098
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79579.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Predicted permeases
L3_105_357G1_scaffold_366_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20137..20679
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79580.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
conserved hypothetical protein, DprA/Smf-related, family 2
L3_105_357G1_scaffold_366_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20797..21558)
DNA (762bp) protein (254aa)
ABC transporter n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00031BCF20
ABC transporter {ECO:0000313|EMBL:CDD79581.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ATPase components of various ABC-type transport systems, contain duplicated ATPase
L3_105_357G1_scaffold_366_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21555..22349)
DNA (795bp) protein (265aa)
ABC transporter n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPG2_9FIRM
ABC transporter {ECO:0000313|EMBL:CDD79582.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
L3_105_357G1_scaffold_366_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22448..23986)
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQ37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79583.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type dipeptide transport system, periplasmic component
L3_105_357G1_scaffold_366_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24021..24887)
DNA (867bp) protein (289aa)
ABC transporter n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMW5_9FIRM
ABC transporter {ECO:0000313|EMBL:CDD79584.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_105_357G1_scaffold_366_25
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24884..25828)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79585.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_105_357G1_scaffold_366_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26328..27236)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CNQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD79586.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Transcriptional regulator
L3_105_357G1_scaffold_366_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27276..28670)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CPG9_9FIRM
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Mg2+ transporter (mgtE)
L3_105_357G1_scaffold_366_28
unknown

Not on your lists

comp(28966..29100)
DNA (135bp) protein (45aa)

This feature has no annotations

L3_105_357G1_scaffold_366_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29429..30097
DNA (669bp) protein (223aa)
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine dehydratase iron-sulfur-dependent beta subunit n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQ44_9FIRM
L-serine dehydratase iron-sulfur-dependent beta subunit {ECO:0000313|EMBL:CDD79588.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L3_105_357G1_scaffold_366_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30117..30986
DNA (870bp) protein (290aa)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit (EC:4.3.1.17)
L-serine dehydratase iron-sulfur-dependent alpha subunit n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CMW9_9FIRM
L-serine dehydratase iron-sulfur-dependent alpha subunit {ECO:0000313|EMBL:CDD79589.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Displaying items 1-30 of 34 in total

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