ggKbase home page

L3_105_357G1_scaffold_402

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_357G1_scaffold_402_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

790..1368
DNA (579bp) protein (193aa)
Uncharacterized protein n=4 Tax=Bacteroides fragilis RepID=I3HNC1_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY92728.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
updY; putative transcriptional regulator
L3_105_357G1_scaffold_402_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1427..1909
DNA (483bp) protein (161aa)
UpdZ n=2 Tax=Bacteroides fragilis RepID=Q8VSS8_BACFG
updZ; putative transcriptional regulator
UpxZ of transcription anti-terminator antagonists family protein {ECO:0000313|EMBL:EXZ93183.1}; TaxID=1339269 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. Korea 419.;"
L3_105_357G1_scaffold_402_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2623..3189
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WMW2_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBW24220.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_105_357G1_scaffold_402_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3462..4556
DNA (1095bp) protein (365aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=I9RJC8_BACFG
putative LPS biosynthesis dehydratase
Polysaccharide biosynthesis family protein {ECO:0000313|EMBL:EXZ03116.1}; TaxID=1339276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. DS-208.;"
L3_105_357G1_scaffold_402_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4572..5702
DNA (1131bp) protein (377aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=I8WWD4_BACFG
putative LPS biosynthesis epimerase
Uncharacterized protein {ECO:0000313|EMBL:EIY42895.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L3_105_357G1_scaffold_402_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5707..6732
DNA (1026bp) protein (342aa)
Putative LPS biosynthesis related n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WMV9_BACF6
putative LPS biosynthesis protein
Putative LPS biosynthesis related {ECO:0000313|EMBL:CBW24217.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_105_357G1_scaffold_402_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6739..7902
DNA (1164bp) protein (388aa)
UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase n=3 Tax=Bacteroides fragilis RepID=I8X5R7_BACFG
putative DegT/DnrJ/EryC1/StrS aminotransferase family O-antigen related protein
Putative DegT/DnrJ/EryC1/StrS aminotransferase family O-antigen related protein {ECO:0000313|EMBL:CBW24216.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_105_357G1_scaffold_402_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7903..8736
DNA (834bp) protein (278aa)
Putative LPS biosynthesis related aldo/keto reductase n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WMV7_BACF6
putative LPS biosynthesis aldo/keto reductase
Putative LPS biosynthesis related aldo/keto reductase {ECO:0000313|EMBL:CBW24215.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_105_357G1_scaffold_402_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8741..9520
DNA (780bp) protein (260aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=I9RJC3_BACFG
putative LPS biosynthesis protein
Cytidylyltransferase family protein {ECO:0000313|EMBL:EXZ03122.1}; TaxID=1339276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. DS-208.;"
L3_105_357G1_scaffold_402_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9533..10840
DNA (1308bp) protein (436aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=I8WWD1_BACFG
putative LPS biosynthesis aminotransferase
Uncharacterized protein {ECO:0000313|EMBL:EIY42890.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L3_105_357G1_scaffold_402_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10852..12258
DNA (1407bp) protein (469aa)
Pseudaminic acid biosynthesis-associated protein PseG n=3 Tax=Bacteroides fragilis RepID=I9G8X3_BACFG
putative LPS biosynthesis Acetyltransferase
Pseudaminic acid biosynthesis-associated protein PseG {ECO:0000313|EMBL:EIY42889.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L3_105_357G1_scaffold_402_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12258..13286
DNA (1029bp) protein (343aa)
Putative spore coat polysaccharide biosynthesis protein E n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WMV3_BACF6
putative spore coat polysaccharide biosynthesis protein E
Putative spore coat polysaccharide biosynthesis protein E {ECO:0000313|EMBL:CBW24211.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_105_357G1_scaffold_402_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13288..14271
DNA (984bp) protein (328aa)
Putative LPS biosynthesis related glycosyltransferase n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WMV2_BACF6
putative LPS biosynthesis glycosyltransferase
Putative LPS biosynthesis related glycosyltransferase {ECO:0000313|EMBL:CBW24210.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_105_357G1_scaffold_402_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14273..15544
DNA (1272bp) protein (424aa)
Putative LPS biosynthesis related protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WMV1_BACF6
putative LPS biosynthesis protein
Putative LPS biosynthesis related protein {ECO:0000313|EMBL:CBW24209.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_105_357G1_scaffold_402_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15548..16636
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WMV0_BACF6
putative LPS biosynthesis hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBW24208.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_105_357G1_scaffold_402_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16639..18483
DNA (1845bp) protein (615aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=E1WMU9_BACF6
Uncharacterized protein {ECO:0000313|EMBL:CBW24207.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
putative LPS biosynthesis hypothetical protein
L3_105_357G1_scaffold_402_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18488..19771
DNA (1284bp) protein (428aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=I8X5Q8_BACFG
putative LPS biosynthesis protein
Uncharacterized protein {ECO:0000313|EMBL:EIY42883.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L3_105_357G1_scaffold_402_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19758..20984
DNA (1227bp) protein (409aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=I8WYF1_BACFG
putative LPS biosynthesis transmembrane protein
Uncharacterized protein {ECO:0000313|EMBL:EIY42882.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L3_105_357G1_scaffold_402_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21007..22176
DNA (1170bp) protein (390aa)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WMU6_BACF6
putative UDP-GlcNAc 2-epimerase
Putative UDP-GlcNAc 2-epimerase {ECO:0000313|EMBL:CBW24204.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_105_357G1_scaffold_402_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22180..23301
DNA (1122bp) protein (374aa)
Possible capsular polysaccharide related protein n=3 Tax=Bacteroides fragilis RepID=E1WMU5_BACF6
capsular polysaccharide related protein
Uncharacterized protein {ECO:0000313|EMBL:EIY42880.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L3_105_357G1_scaffold_402_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23315..24169
DNA (855bp) protein (285aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=I9G8W3_BACFG
putative LPS biosynthesis protein
Uncharacterized protein {ECO:0000313|EMBL:EIY42879.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L3_105_357G1_scaffold_402_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24173..25165
DNA (993bp) protein (331aa)
Uncharacterized protein n=4 Tax=Bacteroides fragilis RepID=I8X5Q3_BACFG
putative LPS biosynthesis protein
Uncharacterized protein {ECO:0000313|EMBL:EIY42878.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L3_105_357G1_scaffold_402_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25171..26184
DNA (1014bp) protein (338aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=I8WYE6_BACFG
putative epimerase/dehydratase
Uncharacterized protein {ECO:0000313|EMBL:EIY42877.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L3_105_357G1_scaffold_402_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26209..27162
DNA (954bp) protein (318aa)
Putative LPS biosynthesis related glycosyl transferase n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WMU1_BACF6
putative LPS biosynthesis glycosyl transferase
Putative LPS biosynthesis related glycosyl transferase {ECO:0000313|EMBL:CBW24199.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_105_357G1_scaffold_402_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27173..27355
DNA (183bp) protein (61aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I8WWC0_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EXZ43219.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
putative phage-related protein
L3_105_357G1_scaffold_402_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27675..28154
DNA (480bp) protein (160aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=I3HN97_BACFG
putative non-specific DNA binding protein
Uncharacterized protein {ECO:0000313|EMBL:EIY93154.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_105_357G1_scaffold_402_27
unknown

Not on your lists

28419..28523
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis CL05T00C42 RepID=I9JW04_BACFG
L3_105_357G1_scaffold_402_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28873..30945
DNA (2073bp) protein (691aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WMT9_BACF6
Uncharacterized protein {ECO:0000313|EMBL:CBW24197.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
hypothetical protein
L3_105_357G1_scaffold_402_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30995..31429)
DNA (435bp) protein (145aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=E1WMT8_BACF6
hypothetical protein
Thioesterase superfamily protein {ECO:0000313|EMBL:EXZ43215.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
L3_105_357G1_scaffold_402_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31542..32072
DNA (531bp) protein (177aa)
Uncharacterized protein n=11 Tax=Bacteroides RepID=E1WMT7_BACF6
putative translation factor
tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family {ECO:0000313|EMBL:EXZ27079.1}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
Displaying items 1-30 of 35 in total

View Taxonomy