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L3_105_357G1_scaffold_406

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_357G1_scaffold_406_1
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

282..1385
DNA (1104bp) protein (368aa)
L-ascorbate 6-phosphate lactonase (EC:3.1.1.-)
L-ascorbate 6-phosphate lactonase n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VKM8_9FIRM
L-ascorbate 6-phosphate lactonase {ECO:0000313|EMBL:EFV16590.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L3_105_357G1_scaffold_406_2
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1459..2958
DNA (1500bp) protein (500aa)
Sugar (pentulose and hexulose) kinases (EC:2.7.1.30)
Sugar (Pentulose and hexulose) kinases n=1 Tax=Roseburia sp. CAG:471 RepID=R7E8V4_9FIRM
Sugar (Pentulose and hexulose) kinases {ECO:0000313|EMBL:CDD99165.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
L3_105_357G1_scaffold_406_3
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2933..4345
DNA (1413bp) protein (471aa)
Ascorbate-specific PTS system enzyme IIC n=1 Tax=Roseburia sp. CAG:471 RepID=R7EA10_9FIRM
Ascorbate-specific PTS system enzyme IIC {ECO:0000313|EMBL:CDD99166.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
hypothetical protein
L3_105_357G1_scaffold_406_4
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4390..5439
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7ECF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD99167.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
hypothetical protein
L3_105_357G1_scaffold_406_5
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5607..6305
DNA (699bp) protein (233aa)
araD; L-ribulose-5-phosphate 4-epimerase (EC:5.1.3.4)
L-ribulose-5-phosphate 4-epimerase n=1 Tax=Roseburia sp. CAG:471 RepID=R7EA47_9FIRM
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:CDD99168.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
L3_105_357G1_scaffold_406_6
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6485..7459
DNA (975bp) protein (325aa)
Transcriptional regulator, contains sigma factor-related N-terminal domain (EC:2.7.1.29)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7E8B6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD99169.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
L3_105_357G1_scaffold_406_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7516..7839)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CKS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77933.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_105_357G1_scaffold_406_8
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7989..8990)
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002FF1A32
L-asparaginase {ECO:0000313|EMBL:CCY32185.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
type I L-asparaginase
L3_105_357G1_scaffold_406_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9092..10003)
DNA (912bp) protein (304aa)
nitrite and sulfite reductase subunit n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002FED59F
Uncharacterized protein {ECO:0000313|EMBL:EES76565.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits
L3_105_357G1_scaffold_406_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10173..11018
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00036875E6
Uncharacterized protein {ECO:0000313|EMBL:EES76566.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_105_357G1_scaffold_406_11
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11891..13612
DNA (1722bp) protein (574aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76567.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Subtilisin-like serine proteases
L3_105_357G1_scaffold_406_12
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14158..14784)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IUG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS25493.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
hypothetical protein
L3_105_357G1_scaffold_406_13
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14781..15638)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9J2Q2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS25492.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
ABC-type multidrug transport system, ATPase component
L3_105_357G1_scaffold_406_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15650..16021)
DNA (372bp) protein (124aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=C6JEF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76571.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transcriptional regulator, GntR family
L3_105_357G1_scaffold_406_15
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16518..16763
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76573.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_105_357G1_scaffold_406_16
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16893..18566
DNA (1674bp) protein (558aa)
Resolvase, N-terminal domain protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B9J7_9FIRM
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EEG89949.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_105_357G1_scaffold_406_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18567..20222
DNA (1656bp) protein (552aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76575.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_105_357G1_scaffold_406_18
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20215..21768
DNA (1554bp) protein (518aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76576.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_105_357G1_scaffold_406_19
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21862..23214
DNA (1353bp) protein (451aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76577.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
abortive infection protein
L3_105_357G1_scaffold_406_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23192..23854
DNA (663bp) protein (221aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JEF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77753.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L3_105_357G1_scaffold_406_21
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24100..24798
DNA (699bp) protein (233aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEF8_9FIRM
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
sugar fermentation stimulation protein
L3_105_357G1_scaffold_406_22
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25170..26003
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76581.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_105_357G1_scaffold_406_23
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26071..27189
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76582.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_105_357G1_scaffold_406_24
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27407..29074
DNA (1668bp) protein (556aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76583.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_105_357G1_scaffold_406_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29071..30414
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76584.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_105_357G1_scaffold_406_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30362..30988
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00036BC5A1
Uncharacterized protein {ECO:0000313|EMBL:EES76585.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L3_105_357G1_scaffold_406_27
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31077..31976
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76586.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_105_357G1_scaffold_406_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32035..32559
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JEG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76587.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
Displaying 28 items

View Taxonomy