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L3_105_357G1_scaffold_429

Search features with annotation key words

Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_357G1_scaffold_429_1
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(1..534)
DNA (534bp) protein (178aa)
Uncharacterized protein n=2 Tax=Fusobacterium ulcerans RepID=H1PVK4_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EHO79708.1}; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;"
hypothetical protein
L3_105_357G1_scaffold_429_2
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(886..1308)
DNA (423bp) protein (141aa)
HutP n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJ71_FUSVA
HutP {ECO:0000313|EMBL:EES64689.2}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
hypothetical protein
L3_105_357G1_scaffold_429_3
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(1351..1848)
DNA (498bp) protein (166aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:2.-.-.-)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=2 Tax=Fusobacterium ulcerans RepID=H1PWU0_9FUSO
L3_105_357G1_scaffold_429_4
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(1832..2827)
DNA (996bp) protein (332aa)
RfaE, domain I n=2 Tax=Fusobacterium ulcerans RepID=H1PWU1_9FUSO
RfaE, domain I {ECO:0000313|EMBL:EFS26845.2}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
rfaE bifunctional protein
L3_105_357G1_scaffold_429_5
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(2845..4503)
DNA (1659bp) protein (553aa)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=V9HAY7_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EFS26844.2}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
hypothetical protein
L3_105_357G1_scaffold_429_6
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(4500..5321)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans 12-1B RepID=S2LFX9_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EPC08996.1}; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;"
L3_105_357G1_scaffold_429_7
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(5318..6502)
DNA (1185bp) protein (395aa)
Fimbrial assembly protein PilN n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJ38_FUSVA
Fimbrial assembly protein PilN {ECO:0000313|EMBL:EES64656.1}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
hypothetical protein
L3_105_357G1_scaffold_429_8
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(6495..7085)
DNA (591bp) protein (197aa)
Uncharacterized protein n=2 Tax=Fusobacterium ulcerans RepID=H1PWU5_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EHO79029.1}; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;"
L3_105_357G1_scaffold_429_9
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(7060..7650)
DNA (591bp) protein (197aa)
Prepilin-type cleavage/methylation N-terminal domain protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJ36_FUSVA
Prepilin-type cleavage/methylation N-terminal domain protein {ECO:0000313|EMBL:EES64654.2}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
L3_105_357G1_scaffold_429_10
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(7643..8095)
DNA (453bp) protein (151aa)
Prepilin-type cleavage/methylation N-terminal domain protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJ35_FUSVA
Prepilin-type cleavage/methylation N-terminal domain protein {ECO:0000313|EMBL:EES64653.1}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
L3_105_357G1_scaffold_429_11
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(8092..8547)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans 12-1B RepID=H1PWU9_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EHO79033.1}; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;"
hypothetical protein
L3_105_357G1_scaffold_429_12
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(8532..9032)
DNA (501bp) protein (167aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=2 Tax=Fusobacterium ulcerans RepID=H1PWV0_9FUSO
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:EHO79034.1}; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;"
prepilin-type N-terminal cleavage/methylation domain-containing protein
L3_105_357G1_scaffold_429_13
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(9054..10232)
DNA (1179bp) protein (393aa)
Bacterial type II secretion system domain protein F n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JJ32_FUSVA
Bacterial type II secretion system domain protein F {ECO:0000313|EMBL:EES64650.1}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
hypothetical protein
L3_105_357G1_scaffold_429_14
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(10232..11530)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=V9HAY3_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EFS26834.2}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
hypothetical protein
L3_105_357G1_scaffold_429_15
unknown

Not on your lists

comp(11532..11717)
DNA (186bp) protein (62aa)

This feature has no annotations

L3_105_357G1_scaffold_429_16
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(11718..12266)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JIX2_FUSVA
Uncharacterized protein {ECO:0000313|EMBL:EES64590.1}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
hypothetical protein
L3_105_357G1_scaffold_429_17
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

12467..13516
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JL40_FUSVA
Uncharacterized protein {ECO:0000313|EMBL:EES64158.1}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
L3_105_357G1_scaffold_429_18
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

13513..13968
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans 12-1B RepID=H1PY23_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EFS27439.1}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
hypothetical protein
L3_105_357G1_scaffold_429_19
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

14204..15175
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=V9HQ15_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EFS25578.1}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
hypothetical protein
L3_105_357G1_scaffold_429_20
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

15192..16049
DNA (858bp) protein (286aa)
Uncharacterized protein n=2 Tax=Fusobacterium ulcerans RepID=H1PVW6_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EFS25579.1}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
inner-membrane translocator
L3_105_357G1_scaffold_429_21
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

16055..16816
DNA (762bp) protein (254aa)
Uncharacterized protein n=2 Tax=Fusobacterium ulcerans RepID=H1PVW5_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EFS25580.1}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
ABC transporter
L3_105_357G1_scaffold_429_22
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16907..18346)
DNA (1440bp) protein (480aa)
6-phospho-beta-glucosidase BglA n=1 Tax=Clostridium sp. CAG:411 RepID=R7I805_9CLOT
6-phospho-beta-glucosidase BglA {ECO:0000313|EMBL:CDE47636.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
glycoside hydrolase
L3_105_357G1_scaffold_429_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18392..19774)
DNA (1383bp) protein (461aa)
PTS system, beta-glucoside-specific, IIABC component {ECO:0000313|EMBL:EDN76964.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EDN76964.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
PTS system, beta-glucoside-specific, IIABC component n=3 Tax=Lachnospiraceae RepID=A7B4U1_RUMGN
arbF; PTS system beta-glucoside-specific transporter subunit IIABC
L3_105_357G1_scaffold_429_24
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19982..20860)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:411 RepID=R7I6Z5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE47634.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
transcriptional regulator, RpiR family
L3_105_357G1_scaffold_429_25
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(20979..21395)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JLC7_FUSVA
Uncharacterized protein {ECO:0000313|EMBL:EES63972.1}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
L3_105_357G1_scaffold_429_26
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(21426..22943)
DNA (1518bp) protein (506aa)
Na+/H+ antiporter NhaC n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JLC8_FUSVA
Na+/H+ antiporter NhaC {ECO:0000313|EMBL:EES63973.1}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
nhaC; sodium/proton antiporter NhaC
L3_105_357G1_scaffold_429_27
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(23066..23878)
DNA (813bp) protein (271aa)
virR; two-component response regulator virR (EC:3.1.1.61)
Response regulator receiver domain protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JLC9_FUSVA
Response regulator receiver domain protein {ECO:0000313|EMBL:EES63974.2}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
L3_105_357G1_scaffold_429_28
Fusobacterium varium, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(23841..25145)
DNA (1305bp) protein (435aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JLD0_FUSVA
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EES63975.2}; TaxID=469618 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium varium ATCC 27725.;"
signal transduction histidine kinase
L3_105_357G1_scaffold_429_29
Acidaminococcus sp. BV3L6, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

25600..25944
DNA (345bp) protein (115aa)
DNA-binding helix-turn-helix protein n=1 Tax=Acidaminococcus sp. BV3L6 RepID=U2TT30_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERL16134.1}; TaxID=1111120 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. BV3L6.;"
putative transcriptional regulator
L3_105_357G1_scaffold_429_30
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25934..26986
DNA (1053bp) protein (351aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1396 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus.;"
Cytosine-specific methyltransferase n=1 Tax=Bacillus cereus (strain ATCC 10987) RepID=Q73EJ3_BACC1
DNA-cytosine methyltransferase family protein
Displaying items 1-30 of 33 in total

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