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L3_105_357G1_scaffold_79

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_357G1_scaffold_79_1
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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127..660
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D1L5_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY94458.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_105_357G1_scaffold_79_2
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1109..2611
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D1L3_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY94456.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
secreted protein
L3_105_357G1_scaffold_79_3
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2695..3468)
DNA (774bp) protein (258aa)
Putative prephenate dehydrogenase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D1L2_BACPM
Putative prephenate dehydrogenase {ECO:0000313|EMBL:EDY94455.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
prephenate dehydratase
L3_105_357G1_scaffold_79_4
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3481..4551)
DNA (1071bp) protein (357aa)
3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54)
Putative 3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D1L1_BACPM
Putative 3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:EDY94454.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
L3_105_357G1_scaffold_79_5
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4576..5766)
DNA (1191bp) protein (397aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EDY94453.1}; EC=2.6.1.- {ECO:0000313|EMBL:EDY94453.1};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
LL-diaminopimelate aminotransferase (EC:2.6.1.83)
Aminotransferase, class I/II n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D1L0_BACPM
L3_105_357G1_scaffold_79_6
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5741..6583)
DNA (843bp) protein (281aa)
Prephenate dehydratase {ECO:0000313|EMBL:EDY94452.1}; EC=4.2.1.51 {ECO:0000313|EMBL:EDY94452.1};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
Prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D1K9_BACPM
L3_105_357G1_scaffold_79_7
unknown

Not on your lists

6735..6842
DNA (108bp) protein (36aa)

This feature has no annotations

L3_105_357G1_scaffold_79_8
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6936..8105
DNA (1170bp) protein (390aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EDY94451.1}; EC=2.6.1.- {ECO:0000313|EMBL:EDY94451.1};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
Aminotransferase, class I/II n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D1K8_BACPM
cystathionine beta-lyase
L3_105_357G1_scaffold_79_9
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8186..9139)
DNA (954bp) protein (318aa)
Tetratricopeptide repeat protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D1K7_BACPM
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDY94449.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_105_357G1_scaffold_79_10
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9236..9943
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VEJ8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86359.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
hypothetical protein
L3_105_357G1_scaffold_79_11
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10014..11666)
DNA (1653bp) protein (551aa)
o-succinylbenzoate--CoA ligase (EC:6.2.1.26)
AMP-binding domain protein n=2 Tax=Bacteroides RepID=R5V7I6_9BACE
AMP-binding domain protein {ECO:0000313|EMBL:CCZ86360.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
L3_105_357G1_scaffold_79_12
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11690..12268)
DNA (579bp) protein (193aa)
DNA-binding helix-turn-helix protein n=2 Tax=Bacteroides RepID=B5D1K3_BACPM
Uncharacterized protein {ECO:0000313|EMBL:CCZ86361.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
helix-turn-helix domain-containing protein
L3_105_357G1_scaffold_79_13
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12506..13042
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5W0S0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86362.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
redoxin domain-containing protein
L3_105_357G1_scaffold_79_14
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13042..13842
DNA (801bp) protein (267aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EDY94444.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EDY94444.1};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D1K1_BACPM
cell wall hydrolase/autolysin
L3_105_357G1_scaffold_79_15
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13872..14843)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D1K0_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY94443.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_105_357G1_scaffold_79_16
unknown

Not on your lists

14997..15113
DNA (117bp) protein (39aa)

This feature has no annotations

L3_105_357G1_scaffold_79_17
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15139..16833
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9IFN7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS12149.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
transcriptional regulator
L3_105_357G1_scaffold_79_18
Bacteroides sp. CAG:443, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16952..18346
DNA (1395bp) protein (465aa)
Redoxin domain protein n=1 Tax=Bacteroides sp. CAG:443 RepID=R6NSU3_9BACE
Redoxin domain protein {ECO:0000313|EMBL:CDC00777.1}; TaxID=1262739 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:443.;"
alkyl hydroperoxide reductase
L3_105_357G1_scaffold_79_19
Prevotella sp. CAG:604, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18408..21818
DNA (3411bp) protein (1137aa)
TonB-dependent receptor plug n=1 Tax=Prevotella sp. CAG:604 RepID=R6B0I0_9BACT
TonB-dependent receptor plug {ECO:0000313|EMBL:CDA57698.1}; TaxID=1262932 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:604.;"
hypothetical protein
L3_105_357G1_scaffold_79_20
Bacteroides sp. CAG:443, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21833..23251
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:443 RepID=R6MNS3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDC01308.1}; TaxID=1262739 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:443.;"
RagB/SusD domain-containing protein
L3_105_357G1_scaffold_79_21
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(23413..24462)
DNA (1050bp) protein (350aa)
Protein RecA n=3 Tax=Bacteroides RepID=B5D1J8_BACPM
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
protein recA
L3_105_357G1_scaffold_79_22
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24466..24915)
DNA (450bp) protein (150aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R5VS54_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86366.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
bacterioferritin co-migratory protein
L3_105_357G1_scaffold_79_23
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25010..26203)
DNA (1194bp) protein (398aa)
Saccharopine dehydrogenase n=2 Tax=Bacteroides RepID=B5D1J6_BACPM
Uncharacterized protein {ECO:0000313|EMBL:CCZ86367.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
saccharopine dehydrogenase
L3_105_357G1_scaffold_79_24
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26380..27177
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5V714_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86368.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
hypothetical protein
L3_105_357G1_scaffold_79_25
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27254..28423
DNA (1170bp) protein (390aa)
Phosphoribosylglycinamide formyltransferase 2 {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083136}; Short=GART 2 {ECO:0000256|HAMAP-Rule:MF_01643};; EC=2.1.2.- {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083135};; 5'-phosphoribosylglycinamide transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; Formate-dependent GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01643}; GAR transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
Phosphoribosylglycinamide formyltransferase 2 (EC:4.1.1.21)
Phosphoribosylglycinamide formyltransferase 2 n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D1J3_BACPM
L3_105_357G1_scaffold_79_26
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28537..28788
DNA (252bp) protein (84aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B5D1J2_BACPM
Uncharacterized protein {ECO:0000313|EMBL:CCZ86370.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
cyclomaltodextrinase
L3_105_357G1_scaffold_79_27
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28846..31197)
DNA (2352bp) protein (784aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VS61_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86371.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
transporter
L3_105_357G1_scaffold_79_28
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31219..32397)
DNA (1179bp) protein (393aa)
Outer membrane efflux protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D1I9_BACPM
Outer membrane efflux protein {ECO:0000313|EMBL:EDY94432.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
outer membrane efflux protein
L3_105_357G1_scaffold_79_29
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32522..32746)
DNA (225bp) protein (75aa)
Transcriptional regulator, MarR family n=2 Tax=Bacteroides RepID=B5D1I8_BACPM
Uncharacterized protein {ECO:0000313|EMBL:CCZ86374.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
transcriptional regulator
L3_105_357G1_scaffold_79_30
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32830..32961)
DNA (132bp) protein (44aa)
Transcriptional regulator, MarR family n=2 Tax=Bacteroides RepID=B5D1I8_BACPM
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EDY94431.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
MarR family transcriptional regulator
Displaying items 1-30 of 80 in total

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