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L3_105_357G1_scaffold_363

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_357G1_scaffold_363_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(260..1111)
DNA (852bp) protein (284aa)
Transposase, IS4 family n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VBI6_BACVU
Transposase, IS4 family {ECO:0000313|EMBL:EFG16777.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
transposase IS4
L3_105_357G1_scaffold_363_2
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1224..1421)
DNA (198bp) protein (66aa)
Transposase, IS4 family n=5 Tax=Bacteroides RepID=B0NKR0_BACSE
transposase IS4
Transposase IS4 {ECO:0000313|EMBL:AHF12535.1}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
L3_105_357G1_scaffold_363_3
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1864..2559
DNA (696bp) protein (232aa)
Endonuclease/exonuclease/phosphatase family protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D3L3_BACPM
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EDY94163.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_105_357G1_scaffold_363_4
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2780..3469
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:875 RepID=R7AFT3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD52266.1}; TaxID=1262752 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:875.;"
hypothetical protein
L3_105_357G1_scaffold_363_5
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3393..4622)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VXX0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ88391.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
hypothetical protein
L3_105_357G1_scaffold_363_6
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4723..5058)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5W6X8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ88392.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
ribosome-binding factor A
L3_105_357G1_scaffold_363_7
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5069..5707)
DNA (639bp) protein (213aa)
O-methyltransferase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D3K9_BACPM
O-methyltransferase {ECO:0000313|EMBL:EDY94159.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
methyltransferase
L3_105_357G1_scaffold_363_8
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5710..7170)
DNA (1461bp) protein (487aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D3K8_BACPM
L3_105_357G1_scaffold_363_9
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7181..7612)
DNA (432bp) protein (144aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
3-dehydroquinate dehydratase n=2 Tax=Bacteroides RepID=B5D3K7_BACPM
3-dehydroquinate dehydratase
L3_105_357G1_scaffold_363_10
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7678..8589
DNA (912bp) protein (304aa)
Tyrosine recombinase XerC n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D3K5_BACPM
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
Tyrosine recombinase xerC
L3_105_357G1_scaffold_363_11
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8736..10412
DNA (1677bp) protein (559aa)
Tetratricopeptide repeat protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D3K4_BACPM
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDY94154.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_105_357G1_scaffold_363_12
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10551..11573
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D3K3_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY94153.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_105_357G1_scaffold_363_13
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11596..13134
DNA (1539bp) protein (513aa)
Mg chelatase-like protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D3K2_BACPM
Mg chelatase-like protein {ECO:0000313|EMBL:EDY94152.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
Mg chelatase subunit ChlI
L3_105_357G1_scaffold_363_14
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13156..15930)
DNA (2775bp) protein (925aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D3K1_BACPM
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EDY94151.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
G-D-S-L family lipolytic protein
L3_105_357G1_scaffold_363_15
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16107..19031
DNA (2925bp) protein (975aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046490}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046490};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D3J9_BACPM
beta-galactosidase
L3_105_357G1_scaffold_363_16
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19173..19583
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D3J8_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY94148.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
LytTR family two component transcriptional regulator
L3_105_357G1_scaffold_363_17
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19712..21619
DNA (1908bp) protein (636aa)
Tetratricopeptide repeat protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D3J7_BACPM
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDY94147.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
signal transduction histidine kinase
L3_105_357G1_scaffold_363_18
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21690..22337
DNA (648bp) protein (216aa)
Response regulator receiver domain protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D3J6_BACPM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDY94146.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
LuxR family transcriptional regulator
L3_105_357G1_scaffold_363_19
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22435..22911
DNA (477bp) protein (159aa)
nucleoside-diphosphate kinase (EC:2.7.4.6)
Putative nucleoside diphosphate kinase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D3J5_BACPM
Putative nucleoside diphosphate kinase {ECO:0000313|EMBL:EDY94145.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
L3_105_357G1_scaffold_363_20
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22951..24285)
DNA (1335bp) protein (445aa)
Polygalacturonase (Pectinase) n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D3J4_BACPM
Polygalacturonase (Pectinase) {ECO:0000313|EMBL:EDY94144.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
glycoside hydrolase family protein
L3_105_357G1_scaffold_363_21
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24524..25654
DNA (1131bp) protein (377aa)
Glycosyl hydrolase, family 88 {ECO:0000313|EMBL:EDY94142.1}; EC=3.2.1.- {ECO:0000313|EMBL:EDY94142.1};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
Glycosyl hydrolase, family 88 n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D3J2_BACPM
glycosyl hydrolase family 88
L3_105_357G1_scaffold_363_22
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25735..26337)
DNA (603bp) protein (201aa)
SIS domain protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D3J1_BACPM
SIS domain protein {ECO:0000313|EMBL:EDY94141.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
iron dicitrate transport regulator FecR
L3_105_357G1_scaffold_363_23
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26361..26894)
DNA (534bp) protein (178aa)
TIGR00730 family protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D3J0_BACPM
TIGR00730 family protein {ECO:0000313|EMBL:EDY94140.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_105_357G1_scaffold_363_24
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27002..28225
DNA (1224bp) protein (408aa)
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:EDY95968.1}; EC=3.4.24.- {ECO:0000313|EMBL:EDY95968.1};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
processing peptidase (EC:3.4.24.64)
Peptidase M16 inactive domain protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXT0_BACPM
L3_105_357G1_scaffold_363_25
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28353..28688
DNA (336bp) protein (112aa)
Transcriptional regulator, AraC family n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXT1_BACPM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDY95969.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
DNA-binding helix-turn-helix protein
L3_105_357G1_scaffold_363_26
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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28774..30591
DNA (1818bp) protein (606aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXT2_BACPM
L3_105_357G1_scaffold_363_27
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30675..31301
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXT3_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY95971.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
ribonuclease H1
L3_105_357G1_scaffold_363_28
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31318..33138
DNA (1821bp) protein (607aa)
Arylsulfatase {ECO:0000313|EMBL:EDY95972.1}; EC=3.1.6.- {ECO:0000313|EMBL:EDY95972.1};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
Arylsulfatase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXT4_BACPM
sulfatase
L3_105_357G1_scaffold_363_29
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33144..33356)
DNA (213bp) protein (71aa)
Nitroreductase family protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXT5_BACPM
Nitroreductase family protein {ECO:0000313|EMBL:EDY95973.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
nitroreductase
L3_105_357G1_scaffold_363_30
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33353..33553)
DNA (201bp) protein (67aa)
Nitroreductase family protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXT5_BACPM
Nitroreductase family protein {ECO:0000313|EMBL:EDY95973.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
nitroreductase
Displaying items 1-30 of 32 in total

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