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L3_105_357G1_scaffold_515

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_357G1_scaffold_515_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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20..1027
DNA (1008bp) protein (336aa)
Putative uncharacterized protein n=1 Tax=Bacteroides eggerthii DSM 20697 RepID=B7ADW8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXY43434.1}; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3774 T13.;"
hypothetical protein
L3_105_357G1_scaffold_515_2
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1083..1634
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Bacteroides eggerthii DSM 20697 RepID=B7ADW8_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEC55107.1}; TaxID=483216 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii DSM 20697.;"
hypothetical protein
L3_105_357G1_scaffold_515_3
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1598..2602)
DNA (1005bp) protein (335aa)
Oxidoreductase, 2-nitropropane dioxygenase family protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CVW0_BACPM
Oxidoreductase, 2-nitropropane dioxygenase family protein {ECO:0000313|EMBL:EDY96407.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
dioxygenase
L3_105_357G1_scaffold_515_4
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2612..4321)
DNA (1710bp) protein (570aa)
Tetratricopeptide repeat protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CVV9_BACPM
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDY96406.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_105_357G1_scaffold_515_5
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4353..5102)
DNA (750bp) protein (250aa)
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CVV8_BACPM
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EDY96405.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
TrmH family RNA methyltransferase
L3_105_357G1_scaffold_515_6
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5121..6788)
DNA (1668bp) protein (556aa)
DNA repair protein RecN n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VAQ1_9BACE
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
DNA repair protein recN
L3_105_357G1_scaffold_515_7
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6795..8000)
DNA (1206bp) protein (402aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EDY96403.1}; EC=4.1.1.36 {ECO:0000313|EMBL:EDY96403.1};; EC=6.3.2.5 {ECO:0000313|EMBL:EDY96403.1};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CVV6_BACPM
L3_105_357G1_scaffold_515_8
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8013..8789)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5W445_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ87462.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
Exonuclease RNase T and DNA polymerase III
L3_105_357G1_scaffold_515_9
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8814..9938)
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CVV4_BACPM
L3_105_357G1_scaffold_515_10
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10115..10486
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B5CVV3_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY96400.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_105_357G1_scaffold_515_11
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11059..11256
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VAQ7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ87465.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
L3_105_357G1_scaffold_515_12
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11578..12030
DNA (453bp) protein (151aa)
Toxin-antitoxin system antitoxin component n=2 Tax=Bacteroidales RepID=D7IMR5_9BACE
hypothetical protein
HI0074 family nucleotidyltransferase substrate binding protein {ECO:0000313|EMBL:EKN28207.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_105_357G1_scaffold_515_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12033..12341
DNA (309bp) protein (103aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6ABW5_9PORP
nucleotidyltransferase
Nucleotidyltransferase domain protein {ECO:0000313|EMBL:KDS64555.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_105_357G1_scaffold_515_14
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12531..12893
DNA (363bp) protein (121aa)
Transcriptional regulator, BlaI/MecI/CopY family n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CVV0_BACPM
Transcriptional regulator, BlaI/MecI/CopY family {ECO:0000313|EMBL:EDY96397.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
CopY family transcriptional repressor
L3_105_357G1_scaffold_515_15
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12890..13198
DNA (309bp) protein (103aa)
Redoxin family protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CVU9_BACPM
Redoxin family protein {ECO:0000313|EMBL:EDY96396.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
L3_105_357G1_scaffold_515_16
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13223..15118
DNA (1896bp) protein (632aa)
TonB-dependent receptor n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CVU8_BACPM
TonB-dependent receptor {ECO:0000313|EMBL:EDY96395.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_105_357G1_scaffold_515_17
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15200..16729)
DNA (1530bp) protein (510aa)
altronate dehydratase (EC:4.2.1.7)
SAF domain protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CVU7_BACPM
SAF domain protein {ECO:0000313|EMBL:EDY96394.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
L3_105_357G1_scaffold_515_18
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16716..17792)
DNA (1077bp) protein (359aa)
Transcriptional regulator, LacI family n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CVU6_BACPM
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EDY96393.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
transcriptional regulator, LacI family
L3_105_357G1_scaffold_515_19
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18010..19032
DNA (1023bp) protein (341aa)
Kinase, PfkB family n=2 Tax=Bacteroides RepID=B5CVU4_BACPM
Uncharacterized protein {ECO:0000313|EMBL:CCZ86177.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
PfkB domain-containing protein
L3_105_357G1_scaffold_515_20
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19071..19739
DNA (669bp) protein (223aa)
KDPG and KHG aldolase n=2 Tax=Bacteroides RepID=B5CVU3_BACPM
Uncharacterized protein {ECO:0000313|EMBL:CCZ86178.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
KDPG and KHG aldolase
L3_105_357G1_scaffold_515_21
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19923..21017
DNA (1095bp) protein (365aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VE35_9BACE
NGG1p interacting factor 3 protein, NIF3
L3_105_357G1_scaffold_515_22
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21024..21815
DNA (792bp) protein (264aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R5V728_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86180.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
hypothetical protein
L3_105_357G1_scaffold_515_23
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21883..22332)
DNA (450bp) protein (150aa)
Type I restriction enzyme HsdR protein N-terminal domain protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CVU0_BACPM
Type I restriction enzyme HsdR protein N-terminal domain protein {ECO:0000313|EMBL:EDY96387.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_105_357G1_scaffold_515_24
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22537..23313
DNA (777bp) protein (259aa)
Putative AMP nucleosidase {ECO:0000313|EMBL:EDY96385.1}; EC=3.2.2.4 {ECO:0000313|EMBL:EDY96385.1};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
AMP nucleosidase (EC:3.2.2.4)
Putative AMP nucleosidase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CVT8_BACPM
L3_105_357G1_scaffold_515_25
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23324..24340
DNA (1017bp) protein (339aa)
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EDY96384.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EDY96384.1};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
DNA polymerase III, delta subunit n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CVT7_BACPM
DNA polymerase III subunit delta
L3_105_357G1_scaffold_515_26
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25043..25498
DNA (456bp) protein (152aa)
DNA-binding helix-turn-helix protein n=2 Tax=Bacteroides RepID=B5CVT5_BACPM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDY96382.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
helix-turn-helix domain-containing protein
L3_105_357G1_scaffold_515_27
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25593..26369
DNA (777bp) protein (259aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=2 Tax=Bacteroides RepID=R5V732_9BACE
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
oxidoreductase FAD/NAD(P)-binding domain-containing protein
L3_105_357G1_scaffold_515_28
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26357..27268
DNA (912bp) protein (304aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
dihydroorotate dehydrogenase (EC:1.3.98.1)
Dihydroorotate dehydrogenase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CVT3_BACPM
Displaying 28 items

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