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L3_105_357G1_scaffold_880

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_357G1_scaffold_880_1
unknown

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comp(2..61)
DNA (60bp) protein (20aa)

This feature has no annotations

L3_105_357G1_scaffold_880_2
Bacteroides dorei CAG:222, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(238..360)
DNA (123bp) protein (41aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9QN01_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB36905.1}; TaxID=1263042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides dorei CAG:222.;"
L3_105_357G1_scaffold_880_3
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(559..900)
DNA (342bp) protein (114aa)
Ribosomal subunit interface protein n=2 Tax=Bacteroides RepID=B5D3P6_BACPM
Uncharacterized protein {ECO:0000313|EMBL:CCZ86915.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
sigma-54 modulation protein
L3_105_357G1_scaffold_880_4
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(875..1756)
DNA (882bp) protein (294aa)
Tyrosine recombinase XerC n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D3P5_BACPM
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
Tyrosine recombinase xerC
L3_105_357G1_scaffold_880_5
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1830..2021)
DNA (192bp) protein (64aa)
30S ribosomal protein S21 n=2 Tax=Bacteroides RepID=B5D3P4_BACPM
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
30S ribosomal protein S21
L3_105_357G1_scaffold_880_6
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2224..4002
DNA (1779bp) protein (593aa)
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Creatinase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D3P2_BACPM
Creatinase {ECO:0000313|EMBL:EDY94192.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
L3_105_357G1_scaffold_880_7
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4084..5304)
DNA (1221bp) protein (407aa)
Cysteine desulfurase {ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00062216};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
SufS subfamily cysteine desulfurase (EC:4.4.1.16)
Cysteine desulfurase, SufS subfamily n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D3P1_BACPM
L3_105_357G1_scaffold_880_8
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5325..6674)
DNA (1350bp) protein (450aa)
FeS assembly protein SufD n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D3P0_BACPM
FeS assembly protein SufD {ECO:0000313|EMBL:EDY94190.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
FeS assembly protein SufD
L3_105_357G1_scaffold_880_9
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6671..7423)
DNA (753bp) protein (251aa)
FeS assembly ATPase SufC n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D3N9_BACPM
FeS assembly ATPase SufC {ECO:0000313|EMBL:EDY94189.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
FeS assembly ATPase SufC
L3_105_357G1_scaffold_880_10
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7443..8894)
DNA (1452bp) protein (484aa)
FeS assembly protein SufB n=2 Tax=Bacteroides RepID=B5D3N8_BACPM
FeS assembly protein SufB {ECO:0000313|EMBL:EDY94188.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
FeS assembly protein SufB
L3_105_357G1_scaffold_880_11
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8896..9414)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5V9E0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86995.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
colicin V production protein
L3_105_357G1_scaffold_880_12
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9548..12472)
DNA (2925bp) protein (975aa)
Translation initiation factor IF-2 n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D3N6_BACPM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
translation initiation factor IF-2
L3_105_357G1_scaffold_880_13
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12575..13834)
DNA (1260bp) protein (420aa)
Transcription termination factor NusA n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D3N5_BACPM
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
nusA; transcription elongation factor NusA
L3_105_357G1_scaffold_880_14
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13837..14304)
DNA (468bp) protein (156aa)
Ribosome maturation factor RimP n=2 Tax=Bacteroides RepID=B5D3N4_BACPM
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
Ribosome maturation factor rimP
Displaying 14 items

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