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L3_105_357G1_scaffold_1193

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_357G1_scaffold_1193_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..611
DNA (609bp) protein (203aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Clostridium difficile CD42 RepID=T2X073_CLODI
murC; UDP-N-acetylmuramate--L-alanine ligase
L3_105_357G1_scaffold_1193_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(666..1223)
DNA (558bp) protein (186aa)
Uncharacterized protein n=189 Tax=Clostridium difficile RepID=Q181B9_CLOD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL31758.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_105_357G1_scaffold_1193_3
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1294..1470)
DNA (177bp) protein (59aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=B5CZR4_BACPM
Uncharacterized protein {ECO:0000313|EMBL:CDD51889.1}; TaxID=1262752 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:875.;"
hypothetical protein
L3_105_357G1_scaffold_1193_4
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1576..2859)
DNA (1284bp) protein (428aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
tRNA(Ile)-lysidine synthase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CZR3_BACPM
tRNA(Ile)-lysidine synthase
L3_105_357G1_scaffold_1193_5
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3045..3836)
DNA (792bp) protein (264aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R5V728_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86180.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
hypothetical protein
L3_105_357G1_scaffold_1193_6
Bacteroides coprophilus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3843..4937)
DNA (1095bp) protein (365aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=547042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprophilus DSM 18228 = JCM 13818.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Bacteroides coprophilus DSM 18228 = JCM 13818 RepID=S0FE60_9BACE
NGG1p interacting factor 3 protein, NIF3
L3_105_357G1_scaffold_1193_7
Bacteroides helcogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5005..5814)
DNA (810bp) protein (270aa)
Putative uncharacterized protein n=1 Tax=Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P 36-108) RepID=E6SMX7_BACT6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV42693.1}; TaxID=693979 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P; 36-108).;"
L3_105_357G1_scaffold_1193_8
Bacteroides coprophilus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5927..7417)
DNA (1491bp) protein (497aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=547042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprophilus DSM 18228 = JCM 13818.;"
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Bacteroides coprophilus DSM 18228 = JCM 13818 RepID=S0FE58_9BACE
L3_105_357G1_scaffold_1193_9
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7565..8716)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:875 RepID=R7AXK8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD52192.1}; TaxID=1262752 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:875.;"
hypothetical protein
L3_105_357G1_scaffold_1193_10
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8720..10735)
DNA (2016bp) protein (672aa)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00046836}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00046836};; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
1,4-alpha-glucan-branching protein (EC:2.4.1.18)
Alpha amylase catalytic domain protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6D284_9BACE
Displaying 10 items

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