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L3_105_357G1_scaffold_362

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_357G1_scaffold_362_1
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(379..1647)
DNA (1269bp) protein (423aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=2 Tax=Bacteroides RepID=B3JN13_9BACE
L3_105_357G1_scaffold_362_2
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1668..2153)
DNA (486bp) protein (162aa)
Transcriptional regulator, Fur family n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D0B4_BACPM
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EDY94958.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
ferric uptake regulator, Fur family
L3_105_357G1_scaffold_362_3
Bacteroides coprophilus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2184..2855)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Bacteroides coprophilus DSM 18228 = JCM 13818 RepID=S0FCG5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEF77984.1}; TaxID=547042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprophilus DSM 18228 = JCM 13818.;"
hypothetical protein
L3_105_357G1_scaffold_362_4
Bacteroides sp. CAG:443, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2864..4837)
DNA (1974bp) protein (658aa)
Dipeptidyl-peptidase III (EC:3.4.14.4)
Peptidase family M49 n=1 Tax=Bacteroides sp. CAG:443 RepID=R6N4X2_9BACE
Peptidase family M49 {ECO:0000313|EMBL:CDC01351.1}; TaxID=1262739 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:443.;"
L3_105_357G1_scaffold_362_5
Bacteroides sp. CAG:702, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4839..5318)
DNA (480bp) protein (160aa)
Helix-turn-helix domain-containing protein AraC type n=1 Tax=Bacteroides sp. CAG:702 RepID=R5UHR2_9BACE
Helix-turn-helix domain-containing protein AraC type {ECO:0000313|EMBL:CCZ70696.1}; TaxID=1262747 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:702.;"
transcriptional regulator
L3_105_357G1_scaffold_362_6
Bacteroides coprophilus CAG:333, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5473..7308
DNA (1836bp) protein (612aa)
ATP-dependent DNA helicase RecQ n=2 Tax=Bacteroides RepID=R6SH85_9BACE
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:CDC54796.1}; TaxID=1263041 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprophilus CAG:333.;"
ATP-dependent DNA helicase RecQ
L3_105_357G1_scaffold_362_7
Bacteroides sp. CAG:1076, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7591..9186
DNA (1596bp) protein (532aa)
TrkA C-terminal domain protein n=1 Tax=Bacteroides sp. CAG:1076 RepID=R5MLQ2_9BACE
TrkA C-terminal domain protein {ECO:0000313|EMBL:CCY92408.1}; TaxID=1262735 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:1076.;"
transporter
L3_105_357G1_scaffold_362_8
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9670..10197)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:875 RepID=R6ZYD1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD48359.1}; TaxID=1262752 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:875.;"
N-acetyltransferase GCN5
L3_105_357G1_scaffold_362_9
Bacteroides coprophilus CAG:333, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10244..11530)
DNA (1287bp) protein (429aa)
IgA Peptidase M64 family protein n=1 Tax=Bacteroides coprophilus CAG:333 RepID=R6S8M3_9BACE
IgA Peptidase M64 family protein {ECO:0000313|EMBL:CDC53914.1}; TaxID=1263041 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprophilus CAG:333.;"
hypothetical protein
L3_105_357G1_scaffold_362_10
Bacteroides coprophilus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11615..12097
DNA (483bp) protein (161aa)
Transcriptional regulator, AsnC family n=1 Tax=Bacteroides coprophilus DSM 18228 = JCM 13818 RepID=S0FE27_9BACE
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EEF76921.1}; TaxID=547042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprophilus DSM 18228 = JCM 13818.;"
transcriptional regulator, AsnC family
L3_105_357G1_scaffold_362_11
Bacteroides sp. CAG:702, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12184..12666)
DNA (483bp) protein (161aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1262747 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:702.;"
Dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Bacteroides sp. CAG:702 RepID=R5UJX8_9BACE
L3_105_357G1_scaffold_362_12
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12759..13553)
DNA (795bp) protein (265aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
thyA; thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=2 Tax=Bacteroides RepID=B5D2C3_BACPM
L3_105_357G1_scaffold_362_13
Bacteroides sp. CAG:598, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13739..15382)
DNA (1644bp) protein (548aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:598 RepID=R5BZW0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX61140.1}; TaxID=1262743 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:598.;"
hypothetical protein
L3_105_357G1_scaffold_362_14
Bacteroides sp. CAG:598, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15390..17348)
DNA (1959bp) protein (653aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:598 RepID=R5CBS0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX61141.1}; TaxID=1262743 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:598.;"
transglutaminase
L3_105_357G1_scaffold_362_15
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17388..18629)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:875 RepID=R7AXP6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD50752.1}; TaxID=1262752 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:875.;"
outer membrane protein
L3_105_357G1_scaffold_362_16
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18693..20126)
DNA (1434bp) protein (478aa)
Carbon starvation protein CstA n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D2D3_BACPM
Uncharacterized protein {ECO:0000313|EMBL:CCZ87984.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
carbon starvation protein A
L3_105_357G1_scaffold_362_17
Bacteroides coprophilus CAG:333, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20210..21868
DNA (1659bp) protein (553aa)
Uncharacterized protein n=1 Tax=Bacteroides coprophilus CAG:333 RepID=R6SCV3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDC55409.1}; TaxID=1263041 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprophilus CAG:333.;"
S-layer protein
L3_105_357G1_scaffold_362_18
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21968..23140
DNA (1173bp) protein (391aa)
Phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D2D5_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY94728.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
L3_105_357G1_scaffold_362_19
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23518..24627
DNA (1110bp) protein (370aa)
Peptide chain release factor 1 n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D2D7_BACPM
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
prfA; peptide chain release factor 1
L3_105_357G1_scaffold_362_20
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24636..26375
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Bacteroides cellulosilyticus CL02T12C19 RepID=I8WN15_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY39247.1}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL02T12C19.;"
hypothetical protein
L3_105_357G1_scaffold_362_21
Bacteroides sp. CAG:1076, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26388..27212
DNA (825bp) protein (275aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=1262735 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:1076.;"
Orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Bacteroides sp. CAG:1076 RepID=R5MEJ1_9BACE
L3_105_357G1_scaffold_362_22
Bacteroides coprophilus CAG:333, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27498..28538
DNA (1041bp) protein (347aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=1263041 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprophilus CAG:333.;"
UDP-3-O-acylglucosamine N-acyltransferase n=2 Tax=Bacteroides RepID=R6SIW9_9BACE
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
L3_105_357G1_scaffold_362_23
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28544..29929
DNA (1386bp) protein (462aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000256|SAAS:SAAS00064869}; EC=3.5.1.- {ECO:0000256|SAAS:SAAS00041386};; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064862};; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|SAAS:SAAS00041388}; TaxID=1262752 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:875.;"
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:875 RepID=R6ZXF5_9BACE
(3R)-hydroxymyristoyl-ACP dehydratase
L3_105_357G1_scaffold_362_24
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29932..30699
DNA (768bp) protein (256aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D2E1_BACPM
L3_105_357G1_scaffold_362_25
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30756..31310
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:875 RepID=R6ZQE6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD50743.1}; TaxID=1262752 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:875.;"
hypothetical protein
L3_105_357G1_scaffold_362_26
Bacteroides sp. CAG:714, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31408..32313
DNA (906bp) protein (302aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1262749 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:714.;"
tRNA delta(2)-isopentenylpyrophosphate transferase n=1 Tax=Bacteroides barnesiae RepID=UPI0003676501
tRNA dimethylallyltransferase
L3_105_357G1_scaffold_362_27
Bacteroides sp. CAG:714, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32618..33643)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:714 RepID=R6ZMV5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD31787.1}; TaxID=1262749 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:714.;"
family 2 glycosyl transferase
L3_105_357G1_scaffold_362_28
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33640..34959)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VCK9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ88040.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
Fe-S oxidoreductase
L3_105_357G1_scaffold_362_29
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35192..35380
DNA (189bp) protein (63aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B5D275_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY94668.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_105_357G1_scaffold_362_30
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(35627..36076)
DNA (450bp) protein (150aa)
50S ribosomal protein L9 n=2 Tax=Bacteroides RepID=B3JN02_9BACE
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
rplI; 50S ribosomal protein L9
Displaying items 1-30 of 31 in total

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