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L3_105_357G1_scaffold_461

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_357G1_scaffold_461_1
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(200..1486)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CVI3_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY96887.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
L3_105_357G1_scaffold_461_2
Bacteroides sp. CAG:1076, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1526..2908)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:1076 RepID=R5MPU8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCY91724.1}; TaxID=1262735 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:1076.;"
hypothetical protein
L3_105_357G1_scaffold_461_3
Bacteroides coprophilus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3062..3817)
DNA (756bp) protein (252aa)
Response regulator receiver domain protein n=1 Tax=Bacteroides coprophilus DSM 18228 = JCM 13818 RepID=S0F644_9BACE
Response regulator receiver domain protein {ECO:0000313|EMBL:EEF75475.1}; TaxID=547042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprophilus DSM 18228 = JCM 13818.;"
LytTR family two component transcriptional regulator
L3_105_357G1_scaffold_461_4
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3783..5903)
DNA (2121bp) protein (707aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:875 RepID=R7A2E0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD49719.1}; TaxID=1262752 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:875.;"
signal transduction histidine kinase LytS
L3_105_357G1_scaffold_461_5
Bacteroides sp. CAG:714, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6044..7174
DNA (1131bp) protein (377aa)
coproporphyrinogen III oxidase n=1 Tax=Bacteroides barnesiae RepID=UPI0003814A17
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:CDD31803.1}; TaxID=1262749 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:714.;"
oxygen-independent coproporphyrinogen III oxidase
L3_105_357G1_scaffold_461_6
Bacteroides coprophilus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7262..8650)
DNA (1389bp) protein (463aa)
Phosphoglucosamine mutase {ECO:0000313|EMBL:EEF77951.1}; EC=5.4.2.10 {ECO:0000313|EMBL:EEF77951.1};; TaxID=547042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprophilus DSM 18228 = JCM 13818.;"
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6S168_9BACE
phosphoglucomutase/phosphomannomutase
L3_105_357G1_scaffold_461_7
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8681..9343)
DNA (663bp) protein (221aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B3JJQ9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA70289.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
hypothetical protein
L3_105_357G1_scaffold_461_8
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9444..10481)
DNA (1038bp) protein (346aa)
DHH family protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D287_BACPM
DHH family protein {ECO:0000313|EMBL:EDY94680.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
phosphoesterase RecJ domain-containing protein
L3_105_357G1_scaffold_461_9
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10718..12256)
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VCK1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ88025.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
ComEC/Rec2-like protein
L3_105_357G1_scaffold_461_10
Bacteroides coprophilus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12312..12974)
DNA (663bp) protein (221aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=547042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprophilus DSM 18228 = JCM 13818.;"
Ribulose-phosphate 3-epimerase n=2 Tax=Bacteroides RepID=R6T804_9BACE
ribulose-phosphate 3-epimerase
L3_105_357G1_scaffold_461_11
Bacteroides coprophilus CAG:333, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13045..14346)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Bacteroides coprophilus CAG:333 RepID=R6S4L8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDC54925.1}; TaxID=1263041 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprophilus CAG:333.;"
hypothetical protein
L3_105_357G1_scaffold_461_12
Bacteroides coprophilus CAG:333, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14350..14955)
DNA (606bp) protein (202aa)
Sigma-70 region 2 n=1 Tax=Bacteroides coprophilus CAG:333 RepID=R6T808_9BACE
Sigma-70 region 2 {ECO:0000313|EMBL:CDC54927.1}; TaxID=1263041 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprophilus CAG:333.;"
ECF subfamily RNA polymerase sigma-24 subunit
L3_105_357G1_scaffold_461_13
Bacteroides sp. CAG:443, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15137..15829
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:443 RepID=R6MGN3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB97780.1}; TaxID=1262739 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:443.;"
hypothetical protein
L3_105_357G1_scaffold_461_14
Bacteroides sp. CAG:443, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15835..16806)
DNA (972bp) protein (324aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1262739 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:443.;"
Methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Bacteroides sp. CAG:443 RepID=R6MP80_9BACE
L3_105_357G1_scaffold_461_15
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16856..18655)
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:875 RepID=R7AA29_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD52339.1}; TaxID=1262752 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:875.;"
Cl-channel voltage-gated family protein
L3_105_357G1_scaffold_461_16
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18668..19234)
DNA (567bp) protein (189aa)
translation factor Sua5 n=1 Tax=Bacteroides barnesiae RepID=UPI00036FDA6B
Uncharacterized protein {ECO:0000313|EMBL:CDD52340.1}; TaxID=1262752 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:875.;"
Sua5/YciO/YrdC/YwlC family protein
L3_105_357G1_scaffold_461_17
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19403..20473
DNA (1071bp) protein (357aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VBU0_9BACE
L3_105_357G1_scaffold_461_18
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20688..22220)
DNA (1533bp) protein (511aa)
propionyl-CoA carboxylase (EC:6.4.1.3)
Carboxyl transferase domain protein n=2 Tax=Bacteroides RepID=B5CYU3_BACPM
Uncharacterized protein {ECO:0000313|EMBL:CDD49979.1}; TaxID=1262752 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:875.;"
L3_105_357G1_scaffold_461_19
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22223..22738)
DNA (516bp) protein (172aa)
Biotin-requiring enzyme n=2 Tax=Bacteroides RepID=B3JPK8_9BACE
Biotin-requiring enzyme {ECO:0000313|EMBL:EDU99060.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
biotin/lipoyl attachment domain-containing protein
L3_105_357G1_scaffold_461_20
Bacteroides sp. CAG:1076, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22821..24332)
DNA (1512bp) protein (504aa)
acetyl-CoA carboxylase, biotin carboxylase (EC:6.4.1.1)
Acetyl-CoA carboxylase biotin carboxylase subunit n=1 Tax=Bacteroides sp. CAG:1076 RepID=R5MX00_9BACE
Acetyl-CoA carboxylase biotin carboxylase subunit {ECO:0000313|EMBL:CCY89876.1}; TaxID=1262735 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:1076.;"
L3_105_357G1_scaffold_461_21
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24558..25280)
DNA (723bp) protein (241aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VBY8_9BACE
1-acyl-sn-glycerol-3-phosphate acyltransferase
L3_105_357G1_scaffold_461_22
Bacteroides sp. CAG:1076, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25308..26462)
DNA (1155bp) protein (385aa)
Ser/Thr phosphatase family protein n=1 Tax=Bacteroides sp. CAG:1076 RepID=R5N8U5_9BACE
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:CCY93627.1}; TaxID=1262735 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:1076.;"
metallophosphoesterase
L3_105_357G1_scaffold_461_23
Bacteroides sp. CAG:443, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26467..27369)
DNA (903bp) protein (301aa)
Methionine synthase (EC:2.1.1.13)
Vitamin B12 dependent methionine synthase activation domain protein n=1 Tax=Bacteroides sp. CAG:443 RepID=R6MNF2_9BACE
Vitamin B12 dependent methionine synthase activation domain protein {ECO:0000313|EMBL:CDC00305.1}; TaxID=1262739 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:443.;"
L3_105_357G1_scaffold_461_24
Bacteroides sp. CAG:714, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27373..28707)
DNA (1335bp) protein (445aa)
dihydroorotase (EC:3.5.2.3)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:714 RepID=R6Y8X0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD32388.1}; TaxID=1262749 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:714.;"
L3_105_357G1_scaffold_461_25
Bacteroides coprophilus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28719..28952)
DNA (234bp) protein (78aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEF77275.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEF77275.1};; TaxID=547042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprophilus DSM 18228 = JCM 13818.;"
Glycosyltransferase group 2 family protein n=2 Tax=Bacteroides RepID=R6S942_9BACE
Glycosyltransferases involved in cell wall biogenesis
L3_105_357G1_scaffold_461_26
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28930..29424)
DNA (495bp) protein (165aa)
dolichyl-phosphate beta-D-mannosyltransferase (EC:2.4.1.83)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:875 RepID=R7A4K2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD48301.1}; TaxID=1262752 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:875.;"
L3_105_357G1_scaffold_461_27
unknown

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comp(29604..29840)
DNA (237bp) protein (79aa)

This feature has no annotations

Displaying 27 items

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