ggKbase home page

L3_106_000M1_scaffold_6821

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_6821_1
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1..663
DNA (663bp) protein (221aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
tRNA-dihydrouridine synthase n=5 Tax=Bacteroides RepID=C3QA73_9BACE
tRNA-U20-dihydrouridine synthase
L3_106_000M1_scaffold_6821_2
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(844..1263)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9AFA3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY86032.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
PAP2 superfamily.
L3_106_000M1_scaffold_6821_3
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1202..1546)
DNA (345bp) protein (115aa)
PAP2 family protein n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3QS08_9BACE
PAP2 superfamily.
PAP2 family protein {ECO:0000313|EMBL:EEO48856.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
L3_106_000M1_scaffold_6821_4
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1537..2544)
DNA (1008bp) protein (336aa)
Nucleoside-diphosphate-sugar epimerases (EC:5.1.3.2)
Nucleoside-diphosphate-sugar epimerases {ECO:0000313|EMBL:CBK67239.1}; EC=5.1.3.2 {ECO:0000313|EMBL:CBK67239.1};; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
Nucleoside-diphosphate-sugar epimerases n=2 Tax=Bacteroides RepID=D6CYI7_9BACE
L3_106_000M1_scaffold_6821_5
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2589..3191
DNA (603bp) protein (201aa)
RNA polymerase sigma-70 factor n=5 Tax=Bacteroides RepID=C3QA70_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGM99929.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
L3_106_000M1_scaffold_6821_6
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3254..4417
DNA (1164bp) protein (388aa)
Fe2+-dicitrate sensor, membrane component n=2 Tax=Bacteroides RepID=D6CYI9_9BACE
Fe2+-dicitrate sensor, membrane component
Fe2+-dicitrate sensor, membrane component {ECO:0000313|EMBL:CBK67241.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L3_106_000M1_scaffold_6821_7
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4569..8159
DNA (3591bp) protein (1197aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Bacteroides xylanisolvens CL03T12C04 RepID=I9UTE5_9BACE
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIY86036.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
hypothetical protein
L3_106_000M1_scaffold_6821_8
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8183..9604
DNA (1422bp) protein (474aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7M7K9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGM99926.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
SusD family.
Displaying 8 items

View Taxonomy