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L3_106_000M1_scaffold_52

Search features with annotation key words

Displaying items 1-30 of 165 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_52_1
unknown

Not on your lists

92..643
DNA (552bp) protein (184aa)

This feature has no annotations

L3_106_000M1_scaffold_52_2
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1684..2838
DNA (1155bp) protein (385aa)
iron ABC transporter substrate-binding protein n=1 Tax=Alistipes onderdonkii RepID=UPI0003765388
ABC-type Fe3+-hydroxamate transport system periplasmic component {ECO:0000313|EMBL:CDD26309.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Fe3+-hydroxamate ABC transporter periplasmic protein
L3_106_000M1_scaffold_52_3
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2838..3755
DNA (918bp) protein (306aa)
Outer membrane transport energization protein TonB n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRH0_9BACT
Outer membrane transport energization protein TonB {ECO:0000313|EMBL:CDD26308.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
outer membrane transport energization protein TonB
L3_106_000M1_scaffold_52_4
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3756..4763
DNA (1008bp) protein (336aa)
ABC-type Fe3+-siderophore transport system permease component n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z717_9BACT
ABC-type Fe3+-siderophore transport system permease component {ECO:0000313|EMBL:CDD26307.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Fe3+-siderophore ABC transporter permease
L3_106_000M1_scaffold_52_5
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4765..5583
DNA (819bp) protein (273aa)
ABC-type cobalamin/Fe3+-siderophore transport system ATPase component n=1 Tax=Alistipes sp. CAG:29 RepID=R6YCE7_9BACT
ABC-type cobalamin/Fe3+-siderophore transport system ATPase component {ECO:0000313|EMBL:CDD26306.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
cobalamin/Fe3+-siderophore ABC transporter ATPase
L3_106_000M1_scaffold_52_6
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


5944..6195
DNA (252bp) protein (84aa)
30S ribosomal protein S20 n=1 Tax=Alistipes sp. CAG:29 RepID=R6XXD6_9BACT
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
30S ribosomal protein S20
L3_106_000M1_scaffold_52_7
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6471..7508)
DNA (1038bp) protein (346aa)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {ECO:0000256|HAMAP-Rule:MF_02128};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Thiamine-monophosphate kinase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y4P6_9BACT
thiamine-phosphate kinase
L3_106_000M1_scaffold_52_8
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7603..8178
DNA (576bp) protein (192aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
adenylate kinase-like kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRG3_9BACT
L3_106_000M1_scaffold_52_9
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


8527..8871
DNA (345bp) protein (115aa)
30S ribosomal protein S6 n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z712_9BACT
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
SSU ribosomal protein S6P
L3_106_000M1_scaffold_52_10
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


8875..9153
DNA (279bp) protein (93aa)
30S ribosomal protein S18 n=2 Tax=environmental samples RepID=R6WUB6_9BACT
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
SSU ribosomal protein S18P
L3_106_000M1_scaffold_52_11
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


9172..9612
DNA (441bp) protein (147aa)
50S ribosomal protein L9 n=1 Tax=Alistipes sp. CAG:29 RepID=R6XXD1_9BACT
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
50S ribosomal protein L9
L3_106_000M1_scaffold_52_12
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9808..10728)
DNA (921bp) protein (307aa)
multidrug transporter n=1 Tax=Alistipes onderdonkii RepID=UPI000368549E
DMT(drug/metabolite transporter) superfamily permease
DMT(Drug/metabolite transporter) superfamily permease {ECO:0000313|EMBL:AFL77479.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_106_000M1_scaffold_52_13
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10816..11469)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z4N6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25457.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_106_000M1_scaffold_52_14
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(11822..13657)
DNA (1836bp) protein (612aa)
30S ribosomal protein S1 n=1 Tax=Alistipes sp. CAG:29 RepID=R6XP50_9BACT
30S ribosomal protein S1 {ECO:0000313|EMBL:CDD25458.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
30S ribosomal protein S1
L3_106_000M1_scaffold_52_15
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13839..15263)
DNA (1425bp) protein (475aa)
5'-nucleotidase/2' 3'-cyclic phosphodiesterase-like hydrolase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y2G5_9BACT
5'-nucleotidase/2' 3'-cyclic phosphodiesterase-like hydrolase {ECO:0000313|EMBL:CDD25459.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
5'-nucleotidase
L3_106_000M1_scaffold_52_16
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15333..17003
DNA (1671bp) protein (557aa)
Uridine kinase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XUW7_9BACT
Uridine kinase {ECO:0000313|EMBL:CDD25460.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
uridine kinase
L3_106_000M1_scaffold_52_17
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17246..20071
DNA (2826bp) protein (942aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Glycine dehydrogenase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y9Z6_9BACT
glycine dehydrogenase, decarboxylating
L3_106_000M1_scaffold_52_18
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20351..20890
DNA (540bp) protein (180aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
peptidylprolyl isomerase n=1 Tax=Alistipes onderdonkii RepID=UPI00036ED053
FKBP-type peptidyl-prolyl cis-trans isomerase
L3_106_000M1_scaffold_52_19
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21160..22548
DNA (1389bp) protein (463aa)
Putative unusual protein kinase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XP56_9BACT
Putative unusual protein kinase {ECO:0000313|EMBL:CDD25463.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
unusual protein kinase
L3_106_000M1_scaffold_52_20
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22496..24319
DNA (1824bp) protein (608aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI000381EE2C
Uncharacterized protein {ECO:0000313|EMBL:CDD25464.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_106_000M1_scaffold_52_21
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24327..25184
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI0003658B62
Uncharacterized protein {ECO:0000313|EMBL:CDD25465.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_106_000M1_scaffold_52_22
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25187..26194
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI000361607A
Uncharacterized protein {ECO:0000313|EMBL:CDD25466.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_106_000M1_scaffold_52_23
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26349..27281
DNA (933bp) protein (311aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
thioredoxin reductase n=1 Tax=Alistipes onderdonkii RepID=UPI0003810DD2
thioredoxin-disulfide reductase
L3_106_000M1_scaffold_52_24
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27288..28211
DNA (924bp) protein (308aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
ribonuclease Z n=1 Tax=Alistipes onderdonkii RepID=UPI00038119E8
beta-lactamase superfamily metal-dependent hydrolase
L3_106_000M1_scaffold_52_25
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28208..28969
DNA (762bp) protein (254aa)
rRNA methylase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y2H4_9BACT
rRNA methylase {ECO:0000313|EMBL:CDD25469.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
rRNA methylase
L3_106_000M1_scaffold_52_26
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29092..29517)
DNA (426bp) protein (142aa)
Alkylhydroperoxidase AhpD family core domain-containing protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XUX9_9BACT
Alkylhydroperoxidase AhpD family core domain-containing protein {ECO:0000313|EMBL:CDD25470.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
carboxymuconolactone decarboxylase
L3_106_000M1_scaffold_52_27
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29616..29975)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6YA06_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25471.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_106_000M1_scaffold_52_28
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29979..30095)
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z4Q2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25472.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_106_000M1_scaffold_52_29
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30336..31430
DNA (1095bp) protein (365aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XP69_9BACT
L3_106_000M1_scaffold_52_30
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31433..31843
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y2H9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25474.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Displaying items 1-30 of 165 in total

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