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L3_106_000M1_scaffold_54

Search features with annotation key words

Displaying items 1-30 of 179 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_54_1
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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322..1035
DNA (714bp) protein (238aa)
Tetratricopeptide repeat protein n=1 Tax=Bacteroides clarus YIT 12056 RepID=F3PFN8_9BACE
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EGF54067.1}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
hypothetical protein
L3_106_000M1_scaffold_54_2
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1109..3118)
DNA (2010bp) protein (670aa)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00046836}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00046836};; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
1,4-alpha-glucan-branching enzyme n=1 Tax=Bacteroides clarus YIT 12056 RepID=F3PFN7_9BACE
alpha amylase
L3_106_000M1_scaffold_54_3
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3145..3591)
DNA (447bp) protein (149aa)
YhcH/YjgK/YiaL family protein n=2 Tax=Bacteroides RepID=F3PFN6_9BACE
YhcH/YjgK/YiaL family protein {ECO:0000313|EMBL:EGF54065.1}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
hypothetical protein
L3_106_000M1_scaffold_54_4
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3631..4296)
DNA (666bp) protein (222aa)
TIGR02453 family protein n=2 Tax=Bacteroides RepID=F3PFN5_9BACE
TIGR02453 family protein {ECO:0000313|EMBL:EGF54064.1}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
hypothetical protein
L3_106_000M1_scaffold_54_5
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4595..4834
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=F3PFN4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB82055.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
hypothetical protein
L3_106_000M1_scaffold_54_6
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4862..6559)
DNA (1698bp) protein (566aa)
Alpha amylase catalytic domain protein n=1 Tax=Bacteroides clarus CAG:160 RepID=R6LEV2_9BACE
Alpha amylase catalytic domain protein {ECO:0000313|EMBL:CDB82054.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
alpha amylase
L3_106_000M1_scaffold_54_7
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6587..7396)
DNA (810bp) protein (270aa)
Phospholipase, patatin family n=2 Tax=Bacteroides RepID=F3PFN2_9BACE
Phospholipase patatin family {ECO:0000313|EMBL:CDB82053.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
patatin
L3_106_000M1_scaffold_54_8
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7484..7879)
DNA (396bp) protein (132aa)
Phosphoribosyl transferase domain protein n=1 Tax=Bacteroides clarus YIT 12056 RepID=F3PFN1_9BACE
Phosphoribosyl transferase domain protein {ECO:0000313|EMBL:EGF54060.1}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
hypothetical protein
L3_106_000M1_scaffold_54_9
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7892..9013)
DNA (1122bp) protein (374aa)
4Fe-4S binding domain protein n=2 Tax=Bacteroides RepID=F3PFN0_9BACE
4Fe-4S binding domain protein {ECO:0000313|EMBL:EGF54059.1}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
4Fe-4S ferredoxin
L3_106_000M1_scaffold_54_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9452..10711
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9DW76_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EYE43771.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
hypothetical protein
L3_106_000M1_scaffold_54_11
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10669..11775
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Bacteroides gallinarum RepID=UPI0003644563
Uncharacterized protein {ECO:0000313|EMBL:EKU88734.1}; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12058.;"
hypothetical protein
L3_106_000M1_scaffold_54_12
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11851..13125
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Bacteroides gallinarum RepID=UPI00035D359D
Uncharacterized protein {ECO:0000313|EMBL:EKU88735.1}; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12058.;"
hypothetical protein
L3_106_000M1_scaffold_54_13
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13280..14332
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Bacteroides gallinarum RepID=UPI00035F6844
Uncharacterized protein {ECO:0000313|EMBL:EFV66815.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L3_106_000M1_scaffold_54_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14416..16116
DNA (1701bp) protein (567aa)
hypothetical protein n=1 Tax=Bacteroides gallinarum RepID=UPI00037F3D19
Uncharacterized protein {ECO:0000313|EMBL:EIY82661.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L3_106_000M1_scaffold_54_15
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16113..16913)
DNA (801bp) protein (267aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase n=1 Tax=Bacteroides stercoris CC31F RepID=S3Z986_BACSE
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EPH17355.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
L3_106_000M1_scaffold_54_16
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16943..17536)
DNA (594bp) protein (198aa)
thiamine phosphate pyrophosphorylase n=1 Tax=Bacteroides gallinarum RepID=UPI00035F9B33
Thiamine monophosphate synthase/TENI {ECO:0000313|EMBL:CDA49131.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
thiamine monophosphate synthase
L3_106_000M1_scaffold_54_17
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17562..18257)
DNA (696bp) protein (232aa)
ThiF family protein n=1 Tax=Bacteroides clarus YIT 12056 RepID=F3PFM3_9BACE
ThiF family protein {ECO:0000313|EMBL:EGF54052.1}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
putative molybdopterin biosynthesis-related protein
L3_106_000M1_scaffold_54_18
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18288..19415)
DNA (1128bp) protein (376aa)
Thiazole biosynthesis protein ThiH n=1 Tax=Bacteroides clarus CAG:160 RepID=R6LEU7_9BACE
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:CDB82044.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
tyrosine lyase ThiH
L3_106_000M1_scaffold_54_19
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19434..21119)
DNA (1686bp) protein (562aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
Phosphomethylpyrimidine synthase n=1 Tax=Bacteroides clarus YIT 12056 RepID=F3PFM1_9BACE
hydroxymethylpyrimidine synthase
L3_106_000M1_scaffold_54_20
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21140..21916)
DNA (777bp) protein (259aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
Thiazole synthase n=1 Tax=Bacteroides clarus CAG:160 RepID=R6M7N2_9BACE
thiazole-phosphate synthase
L3_106_000M1_scaffold_54_21
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21924..22571)
DNA (648bp) protein (216aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
thiE; thiamine-phosphate diphosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Bacteroides clarus CAG:160 RepID=R6LIS8_9BACE
L3_106_000M1_scaffold_54_22
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22576..22773)
DNA (198bp) protein (66aa)
Thiamine biosynthesis protein ThiS n=2 Tax=Bacteroides RepID=F3PFL8_9BACE
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:CDB82040.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
sulfur carrier protein ThiS
L3_106_000M1_scaffold_54_23
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23086..23973)
DNA (888bp) protein (296aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Bacteroides clarus YIT 12056 RepID=F3PFL7_9BACE
malonyl CoA-ACP transacylase
L3_106_000M1_scaffold_54_24
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24200..24361)
DNA (162bp) protein (54aa)
Conserved domain protein n=1 Tax=Bacteroides clarus YIT 12056 RepID=F3PFL6_9BACE
Conserved domain protein {ECO:0000313|EMBL:EGF54044.1}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
L3_106_000M1_scaffold_54_25
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24369..25100
DNA (732bp) protein (244aa)
Hydrolase NUDIX family n=2 Tax=Bacteroides RepID=R6LEU3_9BACE
Hydrolase NUDIX family {ECO:0000313|EMBL:CDB82039.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
NUDIX hydrolase
L3_106_000M1_scaffold_54_26
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25139..26626
DNA (1488bp) protein (496aa)
Carbohydrate kinase, FGGY family protein n=1 Tax=Bacteroides clarus YIT 12056 RepID=F3PFL4_9BACE
Carbohydrate kinase, FGGY family protein {ECO:0000313|EMBL:EGF54043.1}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
carbohydrate kinase, FGGY family protein
L3_106_000M1_scaffold_54_27
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26676..27992
DNA (1317bp) protein (439aa)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
xylose isomerase (EC:5.3.1.5)
Xylose isomerase n=2 Tax=Bacteroides RepID=F3PFL3_9BACE
L3_106_000M1_scaffold_54_28
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28115..29590
DNA (1476bp) protein (492aa)
MFS transporter, SP family n=1 Tax=Bacteroides clarus YIT 12056 RepID=F3PFL2_9BACE
MFS transporter, SP family {ECO:0000313|EMBL:EGF54041.1}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
MFS transporter, SP family
L3_106_000M1_scaffold_54_29
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29833..31026)
DNA (1194bp) protein (398aa)
Sphingomyelin phosphodiesterase (EC:3.1.4.12)
Type I phosphodiesterase / nucleotide pyrophosphatase n=1 Tax=Bacteroides clarus CAG:160 RepID=R6L8H2_9BACE
Type I phosphodiesterase / nucleotide pyrophosphatase {ECO:0000313|EMBL:CDB82035.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
L3_106_000M1_scaffold_54_30
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31160..32701
DNA (1542bp) protein (514aa)
Hydrolase, carbon-nitrogen family n=2 Tax=Bacteroides RepID=F3PFL0_9BACE
Hydrolase, carbon-nitrogen family {ECO:0000313|EMBL:EGF54039.1}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Displaying items 1-30 of 179 in total

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