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L3_106_000M1_scaffold_59

Search features with annotation key words

Displaying items 1-30 of 206 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_59_1
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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257..1012
DNA (756bp) protein (252aa)
30S ribosomal protein S2 n=2 Tax=Dialister RepID=R5SMW6_9FIRM
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
30S ribosomal protein S2
L3_106_000M1_scaffold_59_2
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1061..1936
DNA (876bp) protein (292aa)
Elongation factor Ts n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLR4_9FIRM
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
translation elongation factor Ts
L3_106_000M1_scaffold_59_3
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2037..2765
DNA (729bp) protein (243aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
Uridylate kinase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLR3_9FIRM
UMP kinase
L3_106_000M1_scaffold_59_4
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2767..3324
DNA (558bp) protein (186aa)
Ribosome-recycling factor n=2 Tax=Dialister RepID=C9LLR2_9FIRM
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
frr; ribosome recycling factor
L3_106_000M1_scaffold_59_5
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3321..3563
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEW96497.1}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
L3_106_000M1_scaffold_59_6
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3556..4278
DNA (723bp) protein (241aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
Isoprenyl transferase n=1 Tax=Dialister invisus CAG:218 RepID=R5SMW1_9FIRM
di-trans
L3_106_000M1_scaffold_59_7
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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4275..5093
DNA (819bp) protein (273aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
Phosphatidate cytidylyltransferase n=1 Tax=Dialister invisus CAG:218 RepID=R5SW86_9FIRM
phosphatidate cytidylyltransferase
L3_106_000M1_scaffold_59_8
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5094..6257
DNA (1164bp) protein (388aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase Dxr (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Dialister invisus CAG:218 RepID=R5SPM6_9FIRM
L3_106_000M1_scaffold_59_9
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6251..7273
DNA (1023bp) protein (341aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
RIP metalloprotease RseP n=1 Tax=Dialister invisus CAG:218 RepID=R5TDA0_9FIRM
RIP metalloprotease RseP
L3_106_000M1_scaffold_59_10
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7283..8338
DNA (1056bp) protein (352aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Dialister invisus CAG:218 RepID=R5T7Z3_9FIRM
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
L3_106_000M1_scaffold_59_11
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


8341..10065
DNA (1725bp) protein (575aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
Proline--tRNA ligase n=1 Tax=Dialister invisus CAG:218 RepID=R5SMV6_9FIRM
prolyl-tRNA synthetase
L3_106_000M1_scaffold_59_12
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10081..10368
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEW96490.1}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
L3_106_000M1_scaffold_59_13
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10365..12494
DNA (2130bp) protein (710aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
Helicase, RecD/TraA family n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLQ3_9FIRM
helicase
L3_106_000M1_scaffold_59_14
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12495..13145
DNA (651bp) protein (217aa)
ComF family protein n=1 Tax=Dialister invisus CAG:218 RepID=R5TD96_9FIRM
ComF family protein {ECO:0000313|EMBL:CCZ55097.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
ComF family protein
L3_106_000M1_scaffold_59_15
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13208..13729)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEW96487.1}; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
L3_106_000M1_scaffold_59_16
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13865..16441
DNA (2577bp) protein (859aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
DNA polymerase n=1 Tax=Dialister invisus CAG:218 RepID=R5SMV0_9FIRM
DNA polymerase I
L3_106_000M1_scaffold_59_17
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16461..17081
DNA (621bp) protein (207aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=2 Tax=Dialister RepID=C9LLP9_9FIRM
L3_106_000M1_scaffold_59_18
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17074..17670
DNA (597bp) protein (199aa)
Transglycosylase SLT domain protein n=2 Tax=Dialister RepID=C9LLP8_9FIRM
Transglycosylase SLT family {ECO:0000313|EMBL:CCZ55093.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
transglycosylase SLT domain protein
L3_106_000M1_scaffold_59_19
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17667..18401
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Dialister invisus CAG:218 RepID=R5TD92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ55092.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
hypothetical protein
L3_106_000M1_scaffold_59_20
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18588..19058
DNA (471bp) protein (157aa)
Ribosome maturation factor RimP n=1 Tax=Dialister invisus CAG:218 RepID=R5T7Y6_9FIRM
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
ribosome maturation factor rimP
L3_106_000M1_scaffold_59_21
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19080..20213
DNA (1134bp) protein (378aa)
Transcription termination factor NusA n=2 Tax=Dialister RepID=C9LLP5_9FIRM
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
transcription termination factor NusA
L3_106_000M1_scaffold_59_22
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20210..20476
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Dialister RepID=C9LLP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ55089.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
hypothetical protein
L3_106_000M1_scaffold_59_23
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20469..20777
DNA (309bp) protein (103aa)
30S ribosomal protein L7 Ae n=1 Tax=Dialister invisus CAG:218 RepID=R5SPL2_9FIRM
30S ribosomal protein L7 Ae {ECO:0000313|EMBL:CCZ55088.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
ribosomal protein L7AE
L3_106_000M1_scaffold_59_24
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20799..23426
DNA (2628bp) protein (876aa)
Translation initiation factor IF-2 n=1 Tax=Dialister invisus CAG:218 RepID=R5SW75_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
translation initiation factor IF-2
L3_106_000M1_scaffold_59_25
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23487..23846
DNA (360bp) protein (120aa)
Ribosome-binding factor A n=2 Tax=Dialister RepID=C9LLP1_9FIRM
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
ribosome-binding factor A
L3_106_000M1_scaffold_59_26
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23836..24801
DNA (966bp) protein (322aa)
DHHA1 domain protein n=2 Tax=Dialister RepID=C9LRE7_9FIRM
DHH family/DHHA1 domain protein {ECO:0000313|EMBL:CCZ55082.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
DHHA1 domain protein
L3_106_000M1_scaffold_59_27
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24801..25652
DNA (852bp) protein (284aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043051}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043054};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
tRNA pseudouridine synthase B n=1 Tax=Dialister invisus CAG:218 RepID=R5T7X8_9FIRM
tRNA pseudouridine synthase B
L3_106_000M1_scaffold_59_28
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

25659..26582
DNA (924bp) protein (308aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
Riboflavin biosynthesis protein RibF n=1 Tax=Dialister invisus DSM 15470 RepID=C9LRE5_9FIRM
riboflavin biosynthesis protein RibF
L3_106_000M1_scaffold_59_29
Dialister invisus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

26769..27974
DNA (1206bp) protein (402aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EEW96473.1}; EC=2.6.1.- {ECO:0000313|EMBL:EEW96473.1};; TaxID=592028 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister invisus DSM 15470.;"
Aminotransferase, class I/II n=1 Tax=Dialister invisus DSM 15470 RepID=C9LRE4_9FIRM
GntR family transcriptional regulator
L3_106_000M1_scaffold_59_30
Dialister invisus CAG:218, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(28038..28982)
DNA (945bp) protein (315aa)
Glyoxylate reductase (NADP(+)) (EC:1.1.1.79)
Glyoxylate reductase n=1 Tax=Dialister invisus CAG:218 RepID=R5SMS4_9FIRM
Glyoxylate reductase {ECO:0000313|EMBL:CCZ55065.1}; TaxID=1263072 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister invisus CAG:218.;"
Displaying items 1-30 of 206 in total

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