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L3_106_000M1_scaffold_127

Search features with annotation key words

Displaying items 1-30 of 136 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_127_1
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..606)
DNA (606bp) protein (202aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RNV3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98356.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
TRAP transporter, DctM subunit
L3_106_000M1_scaffold_127_2
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(599..1111)
DNA (513bp) protein (171aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RNV4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98355.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
TRAP-type C4-dicarboxylate transport system, small permease component
L3_106_000M1_scaffold_127_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1141..2259)
DNA (1119bp) protein (373aa)
DctP family TRAP transporter solute receptor n=3 Tax=Clostridium RepID=N9XLU7_9CLOT
DctP family TRAP transporter solute receptor {ECO:0000313|EMBL:ENZ16165.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
tripartite ATP-independent periplasmic transporter solute receptor, DctP family
L3_106_000M1_scaffold_127_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2311..3339)
DNA (1029bp) protein (343aa)
Chlorophyll synthesis pathway protein BchC n=2 Tax=Clostridium RepID=N9Z6Q1_9CLOT
Chlorophyll synthesis pathway protein BchC {ECO:0000313|EMBL:ENZ16164.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Threonine dehydrogenase and related Zn-dependent dehydrogenases
L3_106_000M1_scaffold_127_5
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3575..4258
DNA (684bp) protein (228aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=N9YVW7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98352.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
transcriptional regulator, GntR family
L3_106_000M1_scaffold_127_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4897..6159)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9Z816_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ16162.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L3_106_000M1_scaffold_127_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6211..7374)
DNA (1164bp) protein (388aa)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XLG5_9CLOT
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:ENZ16161.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
L3_106_000M1_scaffold_127_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7411..8496)
DNA (1086bp) protein (362aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=7 Tax=Clostridium RepID=A8RNW3_9CLOT
L3_106_000M1_scaffold_127_9
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8736..10418)
DNA (1683bp) protein (561aa)
acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase, large subunit, biosynthetic type n=4 Tax=Clostridium RepID=N9Z6P6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00715.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
L3_106_000M1_scaffold_127_10
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10464..12128)
DNA (1665bp) protein (555aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=5 Tax=Clostridium RepID=N9YVW0_9CLOT
L3_106_000M1_scaffold_127_11
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12185..13270)
DNA (1086bp) protein (362aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=2 Tax=Clostridium RepID=N9Z811_9CLOT
L3_106_000M1_scaffold_127_12
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13540..14172)
DNA (633bp) protein (211aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RNW8_9CLOT
Acetyltransferase {ECO:0000313|EMBL:ENZ46353.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
Acetyltransferases
L3_106_000M1_scaffold_127_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14180..16279)
DNA (2100bp) protein (700aa)
Peptidase M28 n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XLT6_9CLOT
Peptidase M28 {ECO:0000313|EMBL:ENZ16155.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
peptidase M28
L3_106_000M1_scaffold_127_14
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16358..17329)
DNA (972bp) protein (324aa)
Uncharacterized protein n=6 Tax=Clostridium RepID=A8RNX1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP17232.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
cell wall binding repeat-containing protein
L3_106_000M1_scaffold_127_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17498..18829)
DNA (1332bp) protein (444aa)
Metal-dependent phosphohydrolase n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YVV6_9CLOT
Metal-dependent phosphohydrolase {ECO:0000313|EMBL:ENZ16153.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
metal dependent phosphohydrolase
L3_106_000M1_scaffold_127_16
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18952..19695)
DNA (744bp) protein (248aa)
Antibiotic ABC transporter permease n=4 Tax=Clostridium RepID=N9Z804_9CLOT
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
ABC transporter
L3_106_000M1_scaffold_127_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19692..20531)
DNA (840bp) protein (280aa)
Antibiotic ABC transporter ATP-binding protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XLF3_9CLOT
Antibiotic ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ16151.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
ABC transporter related protein
L3_106_000M1_scaffold_127_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20568..21353)
DNA (786bp) protein (262aa)
MerR family transcriptional regulator n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XLS9_9CLOT
MerR family transcriptional regulator {ECO:0000313|EMBL:ENZ16150.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
MerR family transcriptional regulator
L3_106_000M1_scaffold_127_19
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21514..21753)
DNA (240bp) protein (80aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9Z6N4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00705.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
L3_106_000M1_scaffold_127_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21869..22783)
DNA (915bp) protein (305aa)
AraC family transcriptional regulator n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YVV0_9CLOT
AraC family transcriptional regulator {ECO:0000313|EMBL:ENZ16148.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
AraC family transcriptional regulator
L3_106_000M1_scaffold_127_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22806..24209)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9Z7Z8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ16147.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L3_106_000M1_scaffold_127_22
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24214..27552)
DNA (3339bp) protein (1113aa)
PAS domain S-box protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XLE8_9CLOT
PAS domain S-box protein {ECO:0000313|EMBL:ENZ16146.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
two-component system sensor histidine kinase
L3_106_000M1_scaffold_127_23
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27552..28826)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=N9XLS3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00701.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
ABC-type sugar transport system, periplasmic component
L3_106_000M1_scaffold_127_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29046..29768)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9Z6M8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ16144.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L3_106_000M1_scaffold_127_25
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29848..30312)
DNA (465bp) protein (155aa)
Glyoxalase n=2 Tax=Clostridium RepID=N9YVU5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00699.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
glyoxalase
L3_106_000M1_scaffold_127_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30525..32075)
DNA (1551bp) protein (517aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Ribonuclease Y n=7 Tax=Clostridium RepID=N9Z7Z4_9CLOT
metal dependent phosphohydrolase
L3_106_000M1_scaffold_127_27
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32210..32827)
DNA (618bp) protein (206aa)
Regulatory protein RecX n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XLE1_9CLOT
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
regulatory protein RecX
L3_106_000M1_scaffold_127_28
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(32824..33960)
DNA (1137bp) protein (379aa)
Protein RecA n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XLR7_9CLOT
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
protein RecA
L3_106_000M1_scaffold_127_29
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34386..35435)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9Z6M3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ16139.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L3_106_000M1_scaffold_127_30
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35573..36742)
DNA (1170bp) protein (390aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RNZ6_9CLOT
Ribose-phosphate diphosphokinase {ECO:0000313|EMBL:ENZ16138.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Displaying items 1-30 of 136 in total

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