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L3_106_000M1_scaffold_129

Search features with annotation key words

Displaying items 1-30 of 141 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_129_1
unknown

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2..478
DNA (477bp) protein (159aa)

This feature has no annotations

L3_106_000M1_scaffold_129_2
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(337..1251)
DNA (915bp) protein (305aa)
Putative membrane protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WYE7_9DELT
Putative membrane protein {ECO:0000313|EMBL:EEB32025.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
hypothetical protein
L3_106_000M1_scaffold_129_3
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1504..1962
DNA (459bp) protein (153aa)
Transcriptional regulator, Fur family n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WYE5_9DELT
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EEB32023.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
Fur family ferric uptake regulator
L3_106_000M1_scaffold_129_4
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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2059..2271
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UW75_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW50197.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
L3_106_000M1_scaffold_129_5
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2334..3131)
DNA (798bp) protein (266aa)
Putative thymidylate synthase, flavin-dependent n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WYE3_9DELT
Putative thymidylate synthase, flavin-dependent {ECO:0000313|EMBL:EEB32020.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
thymidylate synthase complementing protein ThyX
L3_106_000M1_scaffold_129_6
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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3304..4530
DNA (1227bp) protein (409aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WYE1_9DELT
L3_106_000M1_scaffold_129_7
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4794..5639
DNA (846bp) protein (282aa)
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha (EC:4.2.1.2)
Hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WYE0_9DELT
Hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type {ECO:0000313|EMBL:EEB32018.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
L3_106_000M1_scaffold_129_8
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5649..6206
DNA (558bp) protein (186aa)
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WYD9_9DELT
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type {ECO:0000313|EMBL:EEB32017.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha
L3_106_000M1_scaffold_129_9
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6459..7958)
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WYD8_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EEB32016.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
hypothetical protein
L3_106_000M1_scaffold_129_10
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8054..9166)
DNA (1113bp) protein (371aa)
Sugar-binding domain protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WYD7_9DELT
Sugar-binding domain protein {ECO:0000313|EMBL:EEB32015.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
LacI family transcriptional regulator
L3_106_000M1_scaffold_129_11
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9442..10767
DNA (1326bp) protein (442aa)
Transporter, major facilitator family protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WYD5_9DELT
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEB32014.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
major facilitator superfamily protein
L3_106_000M1_scaffold_129_12
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10787..11611
DNA (825bp) protein (275aa)
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA {ECO:0000256|HAMAP-Rule:MF_00905}; Short=3',5'-cyclic AMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; Short=cAMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; EC=3.1.4.17 {ECO:0000256|HAMAP-Rule:MF_00905};; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WYD4_9DELT
metallophosphoesterase
L3_106_000M1_scaffold_129_13
unknown

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11553..12122
DNA (570bp) protein (190aa)

This feature has no annotations

L3_106_000M1_scaffold_129_14
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12119..12811
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WYD2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EEB32010.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
Conserved protein of unknown function
L3_106_000M1_scaffold_129_15
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12928..14292
DNA (1365bp) protein (455aa)
phosphomannomutase (EC:5.4.2.8)
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WYD1_9DELT
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II {ECO:0000313|EMBL:EEB32009.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
L3_106_000M1_scaffold_129_16
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14736..15605
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WYC9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EEB32007.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
permease
L3_106_000M1_scaffold_129_17
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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15895..16518
DNA (624bp) protein (208aa)
Flavin reductase {ECO:0000313|EMBL:EEB32006.1}; EC=1.7.-.- {ECO:0000313|EMBL:EEB32006.1};; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
Flavin reductase n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WYC8_9DELT
NADPH-dependent FMN reductase
L3_106_000M1_scaffold_129_18
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16753..17070
DNA (318bp) protein (106aa)
Multidrug resistance protein, SMR family n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WYC6_9DELT
Multidrug resistance protein, SMR family {ECO:0000313|EMBL:EEB32004.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
small multidrug resistance protein
L3_106_000M1_scaffold_129_19
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17206..18183
DNA (978bp) protein (326aa)
Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WYC5_9DELT
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EEB32003.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
LysR family transcriptional regulator
L3_106_000M1_scaffold_129_20
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18196..18582)
DNA (387bp) protein (129aa)
Putative fluoride ion transporter CrcB n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WYC4_9DELT
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
crcB; protein CrcB homolog
L3_106_000M1_scaffold_129_21
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18929..19651
DNA (723bp) protein (241aa)
Ion channel n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WYC3_9DELT
Ion channel {ECO:0000313|EMBL:EEB32001.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
Ion transport 2 domain-containing protein
L3_106_000M1_scaffold_129_22
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19777..20916)
DNA (1140bp) protein (380aa)
ABC-2 type transporter n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WYC2_9DELT
ABC-2 type transporter {ECO:0000313|EMBL:EEB32000.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
ABC-2 type transporter
L3_106_000M1_scaffold_129_23
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20916..22121)
DNA (1206bp) protein (402aa)
ABC-2 type transporter n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WYC1_9DELT
ABC-2 type transporter {ECO:0000313|EMBL:EEB31999.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
ABC-2 type transporter
L3_106_000M1_scaffold_129_24
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22273..24171)
DNA (1899bp) protein (633aa)
ABC transporter, ATP-binding protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WYC0_9DELT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEB31998.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
ABC transporter-like protein
L3_106_000M1_scaffold_129_25
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24171..25163)
DNA (993bp) protein (331aa)
Auxiliary transport protein, membrane fusion protein (MFP) family protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WYB9_9DELT
Auxiliary transport protein, membrane fusion protein (MFP) family protein {ECO:0000313|EMBL:EEB31997.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
secretion protein HlyD family protein
L3_106_000M1_scaffold_129_26
unknown

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comp(25278..25487)
DNA (210bp) protein (70aa)

This feature has no annotations

L3_106_000M1_scaffold_129_27
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(26046..27305)
DNA (1260bp) protein (420aa)
Hydrogenase maturation GTPase HydF n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WYB6_9DELT
Hydrogenase maturation GTPase HydF {ECO:0000313|EMBL:EEB32063.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
small GTP-binding protein
L3_106_000M1_scaffold_129_28
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27840..28877)
DNA (1038bp) protein (346aa)
Iron-only hydrogenase maturation rSAM protein HydE n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WYB4_9DELT
Iron-only hydrogenase maturation rSAM protein HydE {ECO:0000313|EMBL:EEB32062.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
biotin synthase
L3_106_000M1_scaffold_129_29
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29019..30437)
DNA (1419bp) protein (473aa)
Iron-only hydrogenase maturation rSAM protein HydG n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WYB3_9DELT
Iron-only hydrogenase maturation rSAM protein HydG {ECO:0000313|EMBL:EEB32061.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
iron-only hydrogenase maturation protein HydG
L3_106_000M1_scaffold_129_30
Desulfovibrio oxamicus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30548..30934)
DNA (387bp) protein (129aa)
Periplasmic [Fe] hydrogenase small subunit; EC=1.12.7.2;; Fe hydrogenlyase small chain; Flags: Precursor;; TaxID=884 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio oxamicus (strain Monticello) (Desulfovibrio vulgaris; subsp. oxamicus).;"
ferredoxin hydrogenase (EC:1.12.7.2)
Periplasmic [Fe] hydrogenase small subunit n=1 Tax=Desulfovibrio oxamicus (strain Monticello) RepID=PHFS_DESOM
Displaying items 1-30 of 141 in total

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