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L3_106_000M1_scaffold_168

Search features with annotation key words

Displaying items 1-30 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_168_1
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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35..1045
DNA (1011bp) protein (337aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Bacteroides clarus YIT 12056 RepID=F3PJZ1_9BACE
L3_106_000M1_scaffold_168_2
unknown

Not on your lists

1086..1184
DNA (99bp) protein (33aa)

This feature has no annotations

L3_106_000M1_scaffold_168_3
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1200..3257
DNA (2058bp) protein (686aa)
peptidyl-dipeptidase Dcp (EC:3.4.15.5)
Putative oligopeptidase A n=1 Tax=Bacteroides clarus YIT 12056 RepID=F3PJZ2_9BACE
Putative oligopeptidase A {ECO:0000313|EMBL:EGF50877.1}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
L3_106_000M1_scaffold_168_4
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3254..3772
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Bacteroides clarus CAG:160 RepID=R6LBL5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB83185.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
hypothetical protein
L3_106_000M1_scaffold_168_5
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3787..4224
DNA (438bp) protein (146aa)
Cytidine and deoxycytidylate deaminase zinc-binding region n=2 Tax=Bacteroides RepID=F3PJZ4_9BACE
Cytidine and deoxycytidylate deaminase zinc-binding region {ECO:0000313|EMBL:EGF50879.1}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
CMP/dCMP deaminase zinc-binding protein
L3_106_000M1_scaffold_168_6
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4303..6045
DNA (1743bp) protein (581aa)
Peptidase, S41 family n=1 Tax=Bacteroides clarus YIT 12056 RepID=F3PJZ5_9BACE
Peptidase, S41 family {ECO:0000313|EMBL:EGF50880.1}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
peptidase 3
L3_106_000M1_scaffold_168_7
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5987..6496
DNA (510bp) protein (170aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Bacteroides clarus CAG:160 RepID=R6L6L1_9BACE
5-formyltetrahydrofolate cyclo-ligase
L3_106_000M1_scaffold_168_8
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6493..7278
DNA (786bp) protein (262aa)
Histidinol phosphate phosphatase HisJ family protein n=1 Tax=Bacteroides clarus CAG:160 RepID=R6LI29_9BACE
Histidinol phosphate phosphatase HisJ family protein {ECO:0000313|EMBL:CDB83189.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
histidinol phosphate phosphatase
L3_106_000M1_scaffold_168_9
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7306..7596)
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=F3PJZ8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGF50883.1}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
hypothetical protein
L3_106_000M1_scaffold_168_10
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7593..8861)
DNA (1269bp) protein (423aa)
DNA replication and repair protein RecF n=1 Tax=Bacteroides clarus CAG:160 RepID=R6LLW5_9BACE
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
DNA replication and repair protein RecF
L3_106_000M1_scaffold_168_11
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9052..9735
DNA (684bp) protein (228aa)
Tetratricopeptide repeat protein n=2 Tax=Bacteroides RepID=F3PK00_9BACE
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDB83192.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
hypothetical protein
L3_106_000M1_scaffold_168_12
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9873..10367
DNA (495bp) protein (165aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=2 Tax=Bacteroides RepID=F3PK01_9BACE
L3_106_000M1_scaffold_168_13
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11327..12211
DNA (885bp) protein (295aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=F3PKJ4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB83194.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
hypothetical protein
L3_106_000M1_scaffold_168_14
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12224..12868)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Bacteroides clarus CAG:160 RepID=R6LBM2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB83195.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
hypothetical protein
L3_106_000M1_scaffold_168_15
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12919..13389)
DNA (471bp) protein (157aa)
Putative GAF domain-containing protein A n=1 Tax=Bacteroides clarus CAG:160 RepID=R6LLW9_9BACE
Putative GAF domain-containing protein A {ECO:0000313|EMBL:CDB83196.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
GAF sensor protein
L3_106_000M1_scaffold_168_16
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13405..14304)
DNA (900bp) protein (300aa)
Putative membrane protein n=1 Tax=Bacteroides clarus CAG:160 RepID=R6MB37_9BACE
Putative membrane protein {ECO:0000313|EMBL:CDB83197.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
putative transmembrane protein
L3_106_000M1_scaffold_168_17
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14417..15172)
DNA (756bp) protein (252aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
tRNA pseudouridine synthase A n=1 Tax=Bacteroides clarus CAG:160 RepID=R6L6M2_9BACE
tRNA pseudouridine synthase A
L3_106_000M1_scaffold_168_18
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15372..16001
DNA (630bp) protein (210aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=F3PKJ9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGF50480.1}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
hypothetical protein
L3_106_000M1_scaffold_168_19
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16450..17967)
DNA (1518bp) protein (506aa)
YjeF domain protein n=1 Tax=Bacteroides clarus YIT 12056 RepID=F3PKK0_9BACE
YjeF domain protein {ECO:0000313|EMBL:EGF50481.1}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
carbohydrate kinase, YjeF related protein
L3_106_000M1_scaffold_168_20
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18069..19607
DNA (1539bp) protein (513aa)
Amino acid/peptide transporter n=2 Tax=Bacteroides RepID=F3PKK1_9BACE
Amino acid/peptide transporter {ECO:0000313|EMBL:EGF50482.1}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
amino acid/peptide transporter
L3_106_000M1_scaffold_168_21
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19648..20184
DNA (537bp) protein (179aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=2 Tax=Bacteroides RepID=F3PKK2_9BACE
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CDB83090.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
L3_106_000M1_scaffold_168_22
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20247..20819
DNA (573bp) protein (191aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=2 Tax=Bacteroides RepID=F3PKK3_9BACE
L3_106_000M1_scaffold_168_23
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20889..21452)
DNA (564bp) protein (188aa)
Conserved domain protein n=1 Tax=Bacteroides clarus CAG:160 RepID=R6L6B7_9BACE
Conserved domain protein {ECO:0000313|EMBL:CDB83088.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
hypothetical protein
L3_106_000M1_scaffold_168_24
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21621..22802
DNA (1182bp) protein (394aa)
GTPase Obg n=1 Tax=Bacteroides clarus CAG:160 RepID=R6MAU7_9BACE
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
GTP-binding protein Obg/CgtA
L3_106_000M1_scaffold_168_25
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22799..23611
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Bacteroides clarus YIT 12056 RepID=F3PKK7_9BACE
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
hypothetical protein
L3_106_000M1_scaffold_168_26
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23632..24297
DNA (666bp) protein (222aa)
B3/4 domain protein n=1 Tax=Bacteroides clarus CAG:160 RepID=R6LBD3_9BACE
B3/4 domain protein {ECO:0000313|EMBL:CDB83085.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
hypothetical protein
L3_106_000M1_scaffold_168_27
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24436..25419
DNA (984bp) protein (328aa)
PhoH family protein n=1 Tax=Bacteroides clarus CAG:160 RepID=R6LHU0_9BACE
PhoH family protein {ECO:0000313|EMBL:CDB83084.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
PhoH family protein
L3_106_000M1_scaffold_168_28
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25465..26409
DNA (945bp) protein (315aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002696}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002685};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Bacteroides clarus YIT 12056 RepID=F3PKL0_9BACE
L3_106_000M1_scaffold_168_29
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26532..27269
DNA (738bp) protein (246aa)
Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
demethylmenaquinone methyltransferase (EC:2.1.1.-)
Demethylmenaquinone methyltransferase n=2 Tax=Bacteroides RepID=F3PKL1_9BACE
L3_106_000M1_scaffold_168_30
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27301..28047
DNA (747bp) protein (249aa)
shikimate dehydrogenase (EC:1.1.1.25)
Putative shikimate dehydrogenase n=1 Tax=Bacteroides clarus CAG:160 RepID=R6LLN0_9BACE
Putative shikimate dehydrogenase {ECO:0000313|EMBL:CDB83081.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
Displaying items 1-30 of 120 in total

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