ggKbase home page

L3_106_000M1_scaffold_244

Search features with annotation key words

Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_244_1
unknown

Not on your lists

comp(516..677)
DNA (162bp) protein (54aa)

This feature has no annotations

L3_106_000M1_scaffold_244_2
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

823..1956
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR51_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EEB34438.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
hypothetical protein
L3_106_000M1_scaffold_244_3
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2000..2527
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR52_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EEB34439.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
hypothetical protein
L3_106_000M1_scaffold_244_4
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2560..4659
DNA (2100bp) protein (700aa)
Molybdopterin oxidoreductase n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR53_9DELT
Molybdopterin oxidoreductase {ECO:0000313|EMBL:EEB34440.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
molybdopterin oxidoreductase
L3_106_000M1_scaffold_244_5
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4659..5171
DNA (513bp) protein (171aa)
4Fe-4S binding domain protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR54_9DELT
4Fe-4S binding domain protein {ECO:0000313|EMBL:EEB34441.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
4Fe-4S ferredoxin
L3_106_000M1_scaffold_244_6
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5373..5834
DNA (462bp) protein (154aa)
Transcriptional regulator, MarR family n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR55_9DELT
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EEB34442.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
transcriptional regulator
L3_106_000M1_scaffold_244_7
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5831..6955
DNA (1125bp) protein (375aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR56_9DELT
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EEB34443.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
RND family efflux transporter MFP subunit
L3_106_000M1_scaffold_244_8
Sutterella wadsworthensis, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6957..11447
DNA (4491bp) protein (1497aa)
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter n=1 Tax=Sutterella wadsworthensis HGA0223 RepID=S3BE43_9BURK
Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter {ECO:0000313|EMBL:EPD99593.1}; TaxID=1203554 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella.;" source="Sutterella wadsworthensis HGA0223.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
L3_106_000M1_scaffold_244_9
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11508..12188)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR60_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EEB34447.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
L3_106_000M1_scaffold_244_10
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12295..12870)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR61_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EEB34448.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
L3_106_000M1_scaffold_244_11
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13010..13768)
DNA (759bp) protein (253aa)
ABC transporter, ATP-binding protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR62_9DELT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEB34449.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
ABC transporter-like protein
L3_106_000M1_scaffold_244_12
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13765..15549)
DNA (1785bp) protein (595aa)
ABC transporter, permease protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR63_9DELT
ABC transporter, permease protein {ECO:0000313|EMBL:EEB34450.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
binding-protein-dependent transporters inner membrane component
L3_106_000M1_scaffold_244_13
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15602..16435)
DNA (834bp) protein (278aa)
Phosphate binding protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR64_9DELT
Phosphate binding protein {ECO:0000313|EMBL:EEB34452.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
phosphate binding protein
L3_106_000M1_scaffold_244_14
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16985..17251
DNA (267bp) protein (89aa)
Phage/conjugal plasmid C-4 type zinc finger protein, TraR family n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR66_9DELT
Phage/conjugal plasmid C-4 type zinc finger protein, TraR family {ECO:0000313|EMBL:EEB34453.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
hypothetical protein
L3_106_000M1_scaffold_244_15
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17278..18186
DNA (909bp) protein (303aa)
Putative membrane protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR67_9DELT
Putative membrane protein {ECO:0000313|EMBL:EEB34454.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
hypothetical protein
L3_106_000M1_scaffold_244_16
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18486..19496
DNA (1011bp) protein (337aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR68_9DELT
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EEB34455.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
diguanylate cyclase (GGDEF) domain
L3_106_000M1_scaffold_244_17
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20009..20182
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR69_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EEB34456.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
hypothetical protein
L3_106_000M1_scaffold_244_18
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20270..21091)
DNA (822bp) protein (274aa)
Acyltransferase n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR70_9DELT
Acyltransferase {ECO:0000313|EMBL:EEB34457.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
phospholipid/glycerol acyltransferase
L3_106_000M1_scaffold_244_19
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21091..22317)
DNA (1227bp) protein (409aa)
Recombination factor protein RarA n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR71_9DELT
Recombination factor protein RarA {ECO:0000313|EMBL:EEB34458.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
recombination factor protein RarA
L3_106_000M1_scaffold_244_20
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22327..23064)
DNA (738bp) protein (246aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR72_9DELT
16S ribosomal RNA methyltransferase RsmE
L3_106_000M1_scaffold_244_21
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23061..24779)
DNA (1719bp) protein (573aa)
Uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR73_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EEB34460.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
hypothetical protein
L3_106_000M1_scaffold_244_22
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24978..26012
DNA (1035bp) protein (345aa)
GAF domain protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR75_9DELT
GAF domain protein {ECO:0000313|EMBL:EEB34462.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
putative GAF sensor protein
L3_106_000M1_scaffold_244_23
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26016..27041
DNA (1026bp) protein (342aa)
Cell shape determining protein, MreB/Mrl family n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR76_9DELT
Cell shape determining protein, MreB/Mrl family {ECO:0000313|EMBL:EEB34463.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
rod shape-determining protein MreB
L3_106_000M1_scaffold_244_24
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27197..28006
DNA (810bp) protein (270aa)
inositol-phosphate phosphatase (EC:3.1.3.25)
Inositol monophosphatase family protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR77_9DELT
Inositol monophosphatase family protein {ECO:0000313|EMBL:EEB34464.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
L3_106_000M1_scaffold_244_25
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28003..28470
DNA (468bp) protein (156aa)
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EEB34465.1}; EC=2.3.1.128 {ECO:0000313|EMBL:EEB34465.1};; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR78_9DELT
ribosomal-protein-alanine acetyltransferase
L3_106_000M1_scaffold_244_26
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28487..29233
DNA (747bp) protein (249aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
triose-phosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR79_9DELT
L3_106_000M1_scaffold_244_27
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29276..29743
DNA (468bp) protein (156aa)
Preprotein translocase, SecG subunit n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR80_9DELT
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:EEB34467.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
secG; preprotein translocase subunit SecG
L3_106_000M1_scaffold_244_28
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29814..30806
DNA (993bp) protein (331aa)
Smr domain protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR81_9DELT
Smr domain protein {ECO:0000313|EMBL:EEB34468.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
Smr protein/MutS2
L3_106_000M1_scaffold_244_29
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31068..32012)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR82_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EEB34469.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
hypothetical protein
L3_106_000M1_scaffold_244_30
Desulfovibrio piger, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32303..33118
DNA (816bp) protein (272aa)
Aquaglyceroporin n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WR84_9DELT
Aquaglyceroporin {ECO:0000313|EMBL:EEB34471.1}; TaxID=411464 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio piger ATCC 29098.;"
glycerol uptake facilitator GlpF
Displaying items 1-30 of 95 in total

View Taxonomy