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L3_106_000M1_scaffold_293

Search features with annotation key words

Displaying items 1-30 of 99 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_293_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..322
DNA (321bp) protein (107aa)
Rubrerythrin n=11 Tax=Clostridium clostridioforme RepID=N9WLT2_9CLOT
Rubrerythrin {ECO:0000313|EMBL:ENZ64038.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Rubrerythrin
L3_106_000M1_scaffold_293_2
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

577..1116
DNA (540bp) protein (180aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RKT8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX97539.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
rubrerythrin
L3_106_000M1_scaffold_293_3
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1412..1852)
DNA (441bp) protein (147aa)
ribose-5-phosphate isomerase (EC:5.3.1.6)
Ribose 5-phosphate isomerase B n=4 Tax=Clostridium RepID=N9YM42_9CLOT
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:CCX97528.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
L3_106_000M1_scaffold_293_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1890..3029)
DNA (1140bp) protein (380aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=6 Tax=Clostridium RepID=A8RKU1_9CLOT
L3_106_000M1_scaffold_293_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3192..4250)
DNA (1059bp) protein (353aa)
6-phosphogluconolactonase n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9X1X2_9CLOT
6-phosphogluconolactonase {ECO:0000313|EMBL:ENZ09326.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
6-phosphogluconolactonase
L3_106_000M1_scaffold_293_6
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4548..5081
DNA (534bp) protein (178aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RKU4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP18059.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
XRE family transcriptional regulator
L3_106_000M1_scaffold_293_7
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5113..6189
DNA (1077bp) protein (359aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
spermidine/putrescine ABC transporter ATP-binding subunit (EC:3.6.3.31)
Uncharacterized protein n=5 Tax=Clostridium RepID=A8RKU5_9CLOT
L3_106_000M1_scaffold_293_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6182..7021
DNA (840bp) protein (280aa)
Spermidine/putrescine ABC transporter permease n=3 Tax=Clostridium RepID=N9YM47_9CLOT
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:ENZ09329.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
binding-protein-dependent transport system inner membrane protein
L3_106_000M1_scaffold_293_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7021..7818
DNA (798bp) protein (266aa)
Spermidine/putrescine ABC transporter permease n=5 Tax=Clostridium RepID=N9X2F4_9CLOT
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:ENZ09330.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Spermidine/putrescine-binding periplasmic protein
L3_106_000M1_scaffold_293_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7848..8963
DNA (1116bp) protein (372aa)
Spermidine/putrescine ABC transporter substrate-binding protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9X1X5_9CLOT
Spermidine/putrescine ABC transporter substrate-binding protein {ECO:0000313|EMBL:ENZ09331.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
extracellular solute-binding protein
L3_106_000M1_scaffold_293_11
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9082..9264)
DNA (183bp) protein (61aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=N9YNG6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ47729.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
L3_106_000M1_scaffold_293_12
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9459..9794
DNA (336bp) protein (112aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RKV4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00771.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
DtxR family iron (metal) dependent repressor
L3_106_000M1_scaffold_293_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9805..10374
DNA (570bp) protein (190aa)
Nitroreductase n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YM50_9CLOT
Nitroreductase {ECO:0000313|EMBL:ENZ09334.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
nitroreductase
L3_106_000M1_scaffold_293_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10533..12467)
DNA (1935bp) protein (645aa)
Heavy metal translocating P-type ATPase n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9X2F8_9CLOT
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ENZ09335.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
L3_106_000M1_scaffold_293_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12501..12719)
DNA (219bp) protein (73aa)
Heavy metal transport/detoxification protein n=4 Tax=Clostridium RepID=N9X1Y0_9CLOT
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:ENZ09336.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L3_106_000M1_scaffold_293_16
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12797..13156)
DNA (360bp) protein (120aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RKW0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP18070.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
transcriptional regulator, ArsR family
L3_106_000M1_scaffold_293_17
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13346..15136)
DNA (1791bp) protein (597aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=2 Tax=Clostridium RepID=N9YBP0_9CLOT
Aspartate--tRNA ligase {ECO:0000313|EMBL:CCY00766.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
L3_106_000M1_scaffold_293_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15159..16424)
DNA (1266bp) protein (422aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
Uncharacterized protein n=5 Tax=Clostridium RepID=A8RKW5_9CLOT
Histidine-tRNA ligase {ECO:0000313|EMBL:ENZ09339.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L3_106_000M1_scaffold_293_19
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16521..17474)
DNA (954bp) protein (318aa)
Uroporphyrinogen decarboxylase n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9X2G3_9CLOT
Uroporphyrinogen decarboxylase {ECO:0000313|EMBL:ENZ09340.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Uroporphyrinogen-III decarboxylase-like protein
L3_106_000M1_scaffold_293_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17614..19101)
DNA (1488bp) protein (496aa)
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases (EC:1.3.99.22)
Coproporphyrinogen dehydrogenase HemZ n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9X1Y4_9CLOT
Coproporphyrinogen dehydrogenase HemZ {ECO:0000313|EMBL:ENZ09341.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L3_106_000M1_scaffold_293_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19133..19819)
DNA (687bp) protein (229aa)
Beta-lactamase n=4 Tax=Clostridium RepID=N9YNH4_9CLOT
Beta-lactamase {ECO:0000313|EMBL:ENZ09342.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Zn-dependent hydrolases, including glyoxylases
L3_106_000M1_scaffold_293_22
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19841..22126)
DNA (2286bp) protein (762aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RKW9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00761.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
L3_106_000M1_scaffold_293_23
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22246..24204)
DNA (1959bp) protein (653aa)
diguanylate cyclase precursor (EC:2.7.7.65)
Diguanylate cyclase (GGDEF) domain-containing protein n=2 Tax=Clostridium RepID=N9YM59_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00760.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
L3_106_000M1_scaffold_293_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24245..25717)
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9X2G8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09345.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
lipoprotein
L3_106_000M1_scaffold_293_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25908..26432)
DNA (525bp) protein (175aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=2 Tax=Clostridium RepID=N9X1Y8_9CLOT
L3_106_000M1_scaffold_293_26
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26429..27472)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RKX3_9CLOT
LacI family transcriptional regulator {ECO:0000313|EMBL:ENZ47744.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
alanine racemase
L3_106_000M1_scaffold_293_27
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27529..29097)
DNA (1569bp) protein (523aa)
Glycoside hydrolase n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YBP9_9CLOT
Glycoside hydrolase {ECO:0000313|EMBL:ENZ09348.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
glycoside hydrolase family protein
L3_106_000M1_scaffold_293_28
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29212..30063)
DNA (852bp) protein (284aa)
Uncharacterized protein n=15 Tax=Clostridium RepID=A8RKX5_9CLOT
Oligogalacturonide ABC transporter permease {ECO:0000313|EMBL:ENZ19232.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
binding-protein-dependent transporters inner membrane component
L3_106_000M1_scaffold_293_29
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30070..30963)
DNA (894bp) protein (298aa)
Uncharacterized protein n=16 Tax=Clostridium RepID=A8RKX6_9CLOT
Oligogalacturonide ABC transporter permease {ECO:0000313|EMBL:ENZ34951.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
binding-protein-dependent transporters inner membrane component
L3_106_000M1_scaffold_293_30
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30983..31279)
DNA (297bp) protein (99aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=N9X1Z2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00753.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
Displaying items 1-30 of 99 in total

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