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L3_106_000M1_scaffold_373

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Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_373_1
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

241..1785
DNA (1545bp) protein (515aa)
UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|SAAS:SAAS00085409}; EC=6.3.2.- {ECO:0000256|SAAS:SAAS00276926};; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
UDP-N-acetylmuramyl-tripeptide synthetases (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2 6-diaminopimelate ligase n=1 Tax=Collinsella sp. CAG:289 RepID=R7D797_9ACTN
L3_106_000M1_scaffold_373_2
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2025..3227
DNA (1203bp) protein (401aa)
4Fe-4S binding domain protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FC45_9ACTN
4Fe-4S binding domain protein {ECO:0000313|EMBL:EEP43617.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
L3_106_000M1_scaffold_373_3
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3534..4325
DNA (792bp) protein (264aa)
Channel protein, hemolysin III family n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAQ2_9ACTN
Channel protein, hemolysin III family {ECO:0000313|EMBL:EEP44186.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hemolysin III family channel protein
L3_106_000M1_scaffold_373_4
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4472..5872
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAB5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEA90776.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
hypothetical protein
L3_106_000M1_scaffold_373_5
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5942..6679
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D7A4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD86494.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
hypothetical protein
L3_106_000M1_scaffold_373_6
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6801..7172
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WL51_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX68583.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
hypothetical protein
L3_106_000M1_scaffold_373_7
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7173..7940
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7DAP7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD86502.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
hypothetical protein
L3_106_000M1_scaffold_373_8
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7990..9384
DNA (1395bp) protein (465aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WL53_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX68585.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
polysaccharide deacetylase
L3_106_000M1_scaffold_373_9
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

9520..11022
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D7Z7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD86505.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
polysaccharide deacetylase
L3_106_000M1_scaffold_373_10
unknown

Not on your lists

comp(10911..11138)
DNA (228bp) protein (76aa)

This feature has no annotations

L3_106_000M1_scaffold_373_11
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11373..13253
DNA (1881bp) protein (627aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WL56_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX68518.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
MgtE integral membrane protein
L3_106_000M1_scaffold_373_12
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13261..14508
DNA (1248bp) protein (416aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WL57_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX68519.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
natural resistance-associated macrophage protein
L3_106_000M1_scaffold_373_13
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15010..15387
DNA (378bp) protein (126aa)
Transcriptional regulator, GntR family n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAW8_9ACTN
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EEP43968.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
GntR family transcriptional regulator
L3_106_000M1_scaffold_373_14
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15390..16382
DNA (993bp) protein (331aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAW7_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEP43967.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
ABC transporter
L3_106_000M1_scaffold_373_15
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16382..17092
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAW6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP43966.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_106_000M1_scaffold_373_16
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17451..19967
DNA (2517bp) protein (839aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FC13_9ACTN
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EEP43712.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_106_000M1_scaffold_373_17
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20171..20998
DNA (828bp) protein (276aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WKE1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX69470.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
protein tyrosine/serine phosphatase
L3_106_000M1_scaffold_373_18
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21124..23466)
DNA (2343bp) protein (781aa)
Arylsulfatase {ECO:0000313|EMBL:EBA39113.1}; EC=3.1.6.- {ECO:0000313|EMBL:EBA39113.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Arylsulfatase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBA9_9ACTN
sulfatase
L3_106_000M1_scaffold_373_19
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23627..24442
DNA (816bp) protein (272aa)
Nitroreductase family protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FAW0_9ACTN
Nitroreductase family protein {ECO:0000313|EMBL:EEP43960.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
nitroreductase
L3_106_000M1_scaffold_373_20
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24671..26713)
DNA (2043bp) protein (681aa)
Probable potassium transport system protein kup n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GDW9_9ACTN
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
potassium transporter
L3_106_000M1_scaffold_373_21
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26890..29337)
DNA (2448bp) protein (816aa)
rRNA (guanine-N(2)-)-methyltransferase (EC:2.1.1.171)
Ribosomal RNA large subunit methyltransferase K/L n=1 Tax=Collinsella sp. CAG:289 RepID=R7D7J3_9ACTN
Ribosomal RNA large subunit methyltransferase K/L {ECO:0000256|HAMAP-Rule:MF_01858}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
L3_106_000M1_scaffold_373_22
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29564..30388
DNA (825bp) protein (275aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WKD6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX69465.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
Haloacid dehalogenase domain-containing protein hydrolase type 3
L3_106_000M1_scaffold_373_23
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30883..31299)
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WIF4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX71217.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
hypothetical protein
L3_106_000M1_scaffold_373_24
Collinsella tanakaei, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31524..32498)
DNA (975bp) protein (325aa)
Putative uncharacterized protein n=1 Tax=Collinsella tanakaei YIT 12063 RepID=G1WIF5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EGX71218.1}; TaxID=742742 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella tanakaei YIT 12063.;"
hypothetical protein
L3_106_000M1_scaffold_373_25
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(32661..33290)
DNA (630bp) protein (210aa)
Transcriptional regulator, TetR family n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBY8_9ACTN
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEP43687.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
TetR family transcriptional regulator
L3_106_000M1_scaffold_373_26
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

33418..34104
DNA (687bp) protein (229aa)
Hydrogenase accessory protein HypB n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBY7_9ACTN
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:EEP43686.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hydrogenase nickel incorporation protein HypB
L3_106_000M1_scaffold_373_27
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

34177..36972
DNA (2796bp) protein (932aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBY6_9ACTN
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EEP43685.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
L3_106_000M1_scaffold_373_28
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

37213..37674
DNA (462bp) protein (154aa)
Putative hydrogenase nickel insertion protein HypA n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBY5_9ACTN
Putative hydrogenase nickel insertion protein HypA {ECO:0000313|EMBL:EEP43684.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hydrogenase nickel incorporation protein HypA
L3_106_000M1_scaffold_373_29
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(37873..38583)
DNA (711bp) protein (237aa)
Serine acetyltransferase {ECO:0000256|PIRNR:PIRNR000441}; EC=2.3.1.30 {ECO:0000256|PIRNR:PIRNR000441};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FBY4_9ACTN
L3_106_000M1_scaffold_373_30
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

38875..39525
DNA (651bp) protein (217aa)
SNARE-like domain protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GA56_9ACTN
SNARE-like domain protein {ECO:0000313|EMBL:EEA90911.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
alkaline phosphatase
Displaying items 1-30 of 73 in total

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