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L3_106_000M1_scaffold_391

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_391_1
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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249..1265
DNA (1017bp) protein (339aa)
Peptide chain release factor 2 n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM62_9FIRM
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
peptide chain release factor 2
L3_106_000M1_scaffold_391_2
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1293..2522
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79379.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_106_000M1_scaffold_391_3
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2638..3081
DNA (444bp) protein (148aa)
UPF0735 ACT domain-containing protein BN518_00669 n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMQ3_9FIRM
UPF0735 ACT domain-containing protein BN518_00669 {ECO:0000256|HAMAP-Rule:MF_00707}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_106_000M1_scaffold_391_4
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3087..4280
DNA (1194bp) protein (398aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V7E4_9FIRM
L3_106_000M1_scaffold_391_5
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4228..4989
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VF67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79382.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
putative amidophosphoribosyltransferase
L3_106_000M1_scaffold_391_6
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5000..5410
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79383.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_106_000M1_scaffold_391_7
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5567..5959
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79384.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_106_000M1_scaffold_391_8
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5986..7035
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79385.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_106_000M1_scaffold_391_9
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7082..7987
DNA (906bp) protein (302aa)
Putative membrane protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5V7E9_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CCZ79386.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
conserved hypothetical protein TIGR00159
L3_106_000M1_scaffold_391_10
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7953..9260
DNA (1308bp) protein (436aa)
YbbR family protein n=2 Tax=environmental samples RepID=R5VF74_9FIRM
YbbR family protein {ECO:0000313|EMBL:CCZ79387.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
YbbR family protein
L3_106_000M1_scaffold_391_11
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9289..10638
DNA (1350bp) protein (450aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Roseburia sp. CAG:197 RepID=R5YBS9_9FIRM
L3_106_000M1_scaffold_391_12
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10651..10914
DNA (264bp) protein (88aa)
Phosphocarrier HPr family protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUK1_9FIRM
Phosphocarrier HPr family protein {ECO:0000313|EMBL:CCZ79389.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Phosphotransferase System HPr (HPr) Family
L3_106_000M1_scaffold_391_13
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10964..12319
DNA (1356bp) protein (452aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMR3_9FIRM
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:CCZ79390.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
L3_106_000M1_scaffold_391_14
unknown

Not on your lists

12288..12383
DNA (96bp) protein (32aa)

This feature has no annotations

L3_106_000M1_scaffold_391_15
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12402..13193
DNA (792bp) protein (264aa)
ABC-2 type transporter n=1 Tax=Roseburia sp. CAG:18 RepID=R5V7F3_9FIRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC-type polysaccharide/polyol phosphate export systems, permease component
L3_106_000M1_scaffold_391_16
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13196..13939
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VF79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79392.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
L3_106_000M1_scaffold_391_17
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13958..15145
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79393.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_106_000M1_scaffold_391_18
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15165..16484
DNA (1320bp) protein (440aa)
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UUK5_9FIRM
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase {ECO:0000313|EMBL:CCZ79394.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase
L3_106_000M1_scaffold_391_19
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16486..17598
DNA (1113bp) protein (371aa)
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMR8_9FIRM
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase {ECO:0000313|EMBL:CCZ79395.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Putative polyribitolphosphotransferase
L3_106_000M1_scaffold_391_20
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17617..18351
DNA (735bp) protein (245aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
4-diphosphocytidyl-2-methyl-D-erithritol synthase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V7F7_9FIRM
L3_106_000M1_scaffold_391_21
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18413..19492
DNA (1080bp) protein (360aa)
Nucleoside-diphosphate-sugar epimerases (EC:4.2.1.46)
Nucleoside-diphosphate-sugar epimerases n=1 Tax=Roseburia sp. CAG:18 RepID=R5VF85_9FIRM
Nucleoside-diphosphate-sugar epimerases {ECO:0000313|EMBL:CCZ79397.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_106_000M1_scaffold_391_22
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19495..21558
DNA (2064bp) protein (688aa)
pme8B; pectin methylesterase Pme8B (EC:3.1.1.11)
Metallo-beta-lactamase domain protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM84_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CCZ79398.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_106_000M1_scaffold_391_23
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21569..22339
DNA (771bp) protein (257aa)
Glycosyl transferase family 2 protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMS3_9FIRM
Glycosyl transferase family 2 protein {ECO:0000313|EMBL:CCZ79400.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Glycosyltransferases involved in cell wall biogenesis
L3_106_000M1_scaffold_391_24
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22459..23994
DNA (1536bp) protein (512aa)
Cell envelope-related function transcriptional attenuator common domain n=1 Tax=Roseburia sp. CAG:18 RepID=R5V7G4_9FIRM
Cell envelope-related function transcriptional attenuator common domain {ECO:0000313|EMBL:CCZ79401.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
cell envelope-related function transcriptional attenuator common domain
L3_106_000M1_scaffold_391_25
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24020..25345
DNA (1326bp) protein (442aa)
Ig domain protein group 2 domain protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VF91_9FIRM
Ig domain protein group 2 domain protein {ECO:0000313|EMBL:CCZ79402.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
Glycosidases
L3_106_000M1_scaffold_391_26
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25372..26268
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79403.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_106_000M1_scaffold_391_27
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26747..27352
DNA (606bp) protein (202aa)
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED n=1 Tax=Roseburia sp. CAG:18 RepID=R5UMS8_9FIRM
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED {ECO:0000313|EMBL:CCZ79405.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L3_106_000M1_scaffold_391_28
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27511..29235
DNA (1725bp) protein (575aa)
alpha-phosphoglucomutase (EC:5.4.2.8 5.4.2.2)
Alpha-phosphoglucomutase n=1 Tax=Roseburia sp. CAG:18 RepID=R5V7G9_9FIRM
Alpha-phosphoglucomutase {ECO:0000313|EMBL:CCZ79406.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
L3_106_000M1_scaffold_391_29
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29291..29449
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5VF97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79407.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
L3_106_000M1_scaffold_391_30
Roseburia sp. CAG:18, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29454..30620
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:18 RepID=R5UM96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ79408.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;"
hypothetical protein
Displaying items 1-30 of 89 in total

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