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L3_106_000M1_scaffold_393

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_393_1
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(1..369)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YA16_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD30755.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
L3_106_000M1_scaffold_393_2
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(371..2026)
DNA (1656bp) protein (552aa)
von Willebrand factor type A domain protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YH99_9FIRM
von Willebrand factor type A domain protein {ECO:0000313|EMBL:CDD30754.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
uncharacterized protein containing a von Willebrand factor type A (vWA) domain
L3_106_000M1_scaffold_393_3
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2030..2626
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00036E2603
Uncharacterized protein {ECO:0000313|EMBL:CCX60287.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
hypothetical protein
L3_106_000M1_scaffold_393_4
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2619..2816
DNA (198bp) protein (66aa)
Excisionase family DNA binding domain-containing protein n=2 Tax=Lachnospiraceae RepID=S2YVY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG89981.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
putative transposon excisionase
L3_106_000M1_scaffold_393_5
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2892..4049
DNA (1158bp) protein (386aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D7U1_9CLOT
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERI75591.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Site-specific recombinase XerD
L3_106_000M1_scaffold_393_6
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4779..6512
DNA (1734bp) protein (578aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
signal transduction protein (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8WAB7_9CLOT
L3_106_000M1_scaffold_393_7
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6509..8152
DNA (1644bp) protein (548aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W6C3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ40101.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
two component transcriptional regulator, AraC family
L3_106_000M1_scaffold_393_8
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8168..8476
DNA (309bp) protein (103aa)
Uncharacterized protein {ECO:0000313|EMBL:EOQ40100.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L3_106_000M1_scaffold_393_9
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8477..9457
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W5A3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ40100.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
extracellular solute-binding protein
L3_106_000M1_scaffold_393_10
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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9900..11018
DNA (1119bp) protein (373aa)
Transposase IS110 family n=1 Tax=Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) RepID=E0S092_BUTPB
IS110 family transposase
Transposase IS110 family {ECO:0000313|EMBL:ADL35579.1}; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316); (Clostridium proteoclasticum).;"
L3_106_000M1_scaffold_393_11
Dehalobacter restrictus, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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11529..11885
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. KLE 1728 RepID=U2QMY2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF09447.1}; TaxID=871738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter restrictus DSM 9455.;"
L3_106_000M1_scaffold_393_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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11879..12235
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CI19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29721.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
transposase IS66
L3_106_000M1_scaffold_393_13
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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12216..13394
DNA (1179bp) protein (393aa)
IS66 family element, transposase n=2 Tax=Oscillibacter RepID=U2RFI6_9FIRM
IS66 family element, transposase {ECO:0000313|EMBL:ERK67611.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
transposase IS66
L3_106_000M1_scaffold_393_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13367..14059
DNA (693bp) protein (231aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GU79_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA91654.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_106_000M1_scaffold_393_15
unknown

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14319..14600
DNA (282bp) protein (94aa)

This feature has no annotations

L3_106_000M1_scaffold_393_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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14699..15061
DNA (363bp) protein (121aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R6AY32_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL12448.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_106_000M1_scaffold_393_17
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16823..17227)
DNA (405bp) protein (135aa)
30S ribosomal protein S9 n=2 Tax=Oscillibacter RepID=U2Q8K5_9FIRM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
rpsI; 30S ribosomal protein S9
L3_106_000M1_scaffold_393_18
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17243..17674)
DNA (432bp) protein (144aa)
50S ribosomal protein L13 n=2 Tax=Oscillibacter RepID=U2Q0Z6_9FIRM
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
rplM; 50S ribosomal protein L13
L3_106_000M1_scaffold_393_19
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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18071..18421
DNA (351bp) protein (117aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QJP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK56424.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_106_000M1_scaffold_393_20
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18444..18707)
DNA (264bp) protein (88aa)
Pro-sigmaK processing inhibitor BofA n=2 Tax=Oscillibacter RepID=U2QIX6_9FIRM
Pro-sigmaK processing inhibitor BofA {ECO:0000313|EMBL:ERK56426.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_106_000M1_scaffold_393_21
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18698..18961)
DNA (264bp) protein (88aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2Q8K1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK56428.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_106_000M1_scaffold_393_22
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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19041..19523
DNA (483bp) protein (161aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative deaminase (EC:3.5.4.-)
Cytidine and deoxycytidylate deaminase zinc-binding region n=2 Tax=Oscillibacter RepID=U2QRF0_9FIRM
L3_106_000M1_scaffold_393_23
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19737..20600)
DNA (864bp) protein (288aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QIT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK56386.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_106_000M1_scaffold_393_24
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20751..21779
DNA (1029bp) protein (343aa)
Stage II sporulation protein D n=2 Tax=Oscillibacter RepID=U2Q8P4_9FIRM
Stage II sporulation protein D {ECO:0000313|EMBL:ERK56388.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
spoIID; stage II sporulation protein D
L3_106_000M1_scaffold_393_25
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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21852..22976
DNA (1125bp) protein (375aa)
Polysaccharide deacetylase n=2 Tax=Oscillibacter RepID=U2QJK1_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:ERK56389.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative hydrolase
L3_106_000M1_scaffold_393_26
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23124..23828
DNA (705bp) protein (235aa)
Transcriptional regulatory protein ResD n=2 Tax=Oscillibacter RepID=U2S064_9FIRM
Putative transcriptional regulatory protein ResD {ECO:0000313|EMBL:ERK56390.1}; Flags: Fragment;; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
OmpR family two-component response regulator
L3_106_000M1_scaffold_393_27
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24110..25588
DNA (1479bp) protein (493aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative two-component histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Oscillibacter RepID=U2Q8V7_9FIRM
L3_106_000M1_scaffold_393_28
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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25596..26867
DNA (1272bp) protein (424aa)
serine protease (EC:3.4.21.-)
Trypsin (Fragment) n=1 Tax=Oscillibacter sp. KLE 1745 RepID=U2QNP3_9FIRM
Trypsin {ECO:0000313|EMBL:ERK58126.1}; Flags: Fragment;; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
L3_106_000M1_scaffold_393_29
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27027..27401)
DNA (375bp) protein (125aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2SBG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK63983.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_106_000M1_scaffold_393_30
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27398..27751)
DNA (354bp) protein (118aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2R318_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK63982.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
Displaying items 1-30 of 93 in total

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