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L3_106_000M1_scaffold_404

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_404_1
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(554..922)
DNA (369bp) protein (123aa)
50S ribosomal protein L19 n=2 Tax=Alistipes RepID=B0MVV0_9BACT
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
LSU ribosomal protein L19P
L3_106_000M1_scaffold_404_2
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1485..2258
DNA (774bp) protein (258aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
5'-nucleotidase, exopolyphosphatase, 3'-nucleotidase (EC:3.1.3.5 3.1.3.6 3.6.1.11)
5'-nucleotidase SurE n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVU9_9BACT
L3_106_000M1_scaffold_404_3
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2552..3505
DNA (954bp) protein (318aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=root RepID=B0MVU7_9BACT
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CDE65537.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
signal transduction histidine kinase
L3_106_000M1_scaffold_404_4
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3508..4158
DNA (651bp) protein (217aa)
Response regulator receiver domain protein n=3 Tax=root RepID=B0MVU6_9BACT
Response regulator receiver domain protein {ECO:0000313|EMBL:CDE65540.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L3_106_000M1_scaffold_404_5

Not on your lists

4331..4858
DNA (528bp) protein (176aa)
Uncharacterized protein n=3 Tax=root RepID=B0MVW8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKC61931.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_106_000M1_scaffold_404_6
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5295..6626)
DNA (1332bp) protein (444aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVU5_9BACT
L3_106_000M1_scaffold_404_7
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6640..7647)
DNA (1008bp) protein (336aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU000439}; EC=1.1.1.94 {ECO:0000256|RuleBase:RU000439};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Glycerol-3-phosphate dehydrogenase n=3 Tax=root RepID=B0MVU4_9BACT
glycerol-3-phosphate dehydrogenase
L3_106_000M1_scaffold_404_8
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7925..8944
DNA (1020bp) protein (340aa)
Cell shape determining protein, MreB/Mrl family n=3 Tax=root RepID=B0MVU3_9BACT
Cell shape determining protein MreB/Mrl family {ECO:0000313|EMBL:CDE65549.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
MreB/Mrl family cell shape determining protein
L3_106_000M1_scaffold_404_9
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8973..9818
DNA (846bp) protein (282aa)
Rod shape-determining protein MreC n=3 Tax=root RepID=B0MVU2_9BACT
Rod shape-determining protein MreC {ECO:0000313|EMBL:CDE65552.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
cell shape-determining protein
L3_106_000M1_scaffold_404_10
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9821..10339
DNA (519bp) protein (173aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=B0MVU1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE65554.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
rod shape-determining protein MreD
L3_106_000M1_scaffold_404_11
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10336..12168
DNA (1833bp) protein (611aa)
Putative penicillin-binding protein 2 n=3 Tax=root RepID=B0MVU0_9BACT
Putative penicillin-binding protein 2 {ECO:0000313|EMBL:EDS03468.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Cell division protein FtsI/penicillin-binding protein 2
L3_106_000M1_scaffold_404_12
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12158..13594
DNA (1437bp) protein (479aa)
Putative rod shape-determining protein RodA n=3 Tax=root RepID=B0MVT9_9BACT
Putative rod shape-determining protein RodA {ECO:0000313|EMBL:CDE65558.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
cell division membrane protein
L3_106_000M1_scaffold_404_13
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13630..16224
DNA (2595bp) protein (865aa)
Calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EDS03466.1}; EC=3.6.3.8 {ECO:0000313|EMBL:EDS03466.1};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
plasma-membrane calcium-translocating P-type ATPase (EC:3.6.3.8)
Calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVT8_9BACT
L3_106_000M1_scaffold_404_14
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16393..17514
DNA (1122bp) protein (374aa)
PAP2 family protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVZ5_9BACT
PAP2 family protein {ECO:0000313|EMBL:EDS03464.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
membrane-associated phospholipid phosphatase
L3_106_000M1_scaffold_404_15
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17609..18949)
DNA (1341bp) protein (447aa)
gdh; glutamate dehydrogenase (EC:1.4.1.2)
Glutamate dehydrogenase n=3 Tax=root RepID=B0MVZ4_9BACT
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
L3_106_000M1_scaffold_404_16
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19217..20416
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVZ7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS03462.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L3_106_000M1_scaffold_404_17
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20459..21568
DNA (1110bp) protein (370aa)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Aminomethyltransferase n=4 Tax=root RepID=B0MVZ3_9BACT
glycine cleavage system T protein
L3_106_000M1_scaffold_404_18
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21753..22409)
DNA (657bp) protein (219aa)
HD domain protein n=2 Tax=root RepID=B0MVZ2_9BACT
HD domain protein {ECO:0000313|EMBL:EDS03459.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
HD superfamily hydrolase
L3_106_000M1_scaffold_404_19
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22467..24014)
DNA (1548bp) protein (516aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Ribonuclease Y n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVZ1_9BACT
hypothetical protein
L3_106_000M1_scaffold_404_20
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24338..24676)
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=B0MVZ0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE65580.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Cell division protein ZapA
L3_106_000M1_scaffold_404_21
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24730..25050)
DNA (321bp) protein (107aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=B0MVY9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE65581.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L3_106_000M1_scaffold_404_22
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25299..26597)
DNA (1299bp) protein (433aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
SSU ribosomal protein S12P methylthiotransferase (EC:2.-.-.-)
Ribosomal protein S12 methylthiotransferase RimO n=3 Tax=root RepID=B0MVY7_9BACT
L3_106_000M1_scaffold_404_23
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26610..27707)
DNA (1098bp) protein (366aa)
Signal recognition particle receptor FtsY n=4 Tax=root RepID=B0MVY6_9BACT
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
signal recognition particle-docking protein FtsY
L3_106_000M1_scaffold_404_24
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28223..28381)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JNR1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE65584.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L3_106_000M1_scaffold_404_25
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(28394..28576)
DNA (183bp) protein (61aa)
50S ribosomal protein L33 n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JNQ0_9BACT
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
50S ribosomal protein L33
L3_106_000M1_scaffold_404_26
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(28591..28824)
DNA (234bp) protein (78aa)
50S ribosomal protein L28 n=3 Tax=root RepID=B0MVY4_9BACT
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
50S ribosomal protein L28
L3_106_000M1_scaffold_404_27
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28943..31048)
DNA (2106bp) protein (702aa)
Uncharacterized protein n=5 Tax=root RepID=B0MVX9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS03450.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
L3_106_000M1_scaffold_404_28
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31764..33017)
DNA (1254bp) protein (418aa)
CinA-like protein n=2 Tax=root RepID=B0MVX8_9BACT
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
competence/damage-inducible protein CinA-like protein
L3_106_000M1_scaffold_404_29
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33033..34103)
DNA (1071bp) protein (357aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|SAAS:SAAS00084821}; EC=1.3.5.2 {ECO:0000256|SAAS:SAAS00084821};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
dihydroorotate oxidase A (EC:1.3.98.1)
Dihydroorotate oxidase n=2 Tax=Alistipes RepID=B0MVX7_9BACT
L3_106_000M1_scaffold_404_30
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34159..35154)
DNA (996bp) protein (332aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EDS03447.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EDS03447.1};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
4-phosphoerythronate dehydrogenase (EC:1.1.1.290)
4-phosphoerythronate dehydrogenase n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVX6_9BACT
Displaying items 1-30 of 77 in total

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