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L3_106_000M1_scaffold_523

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_523_1
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(320..1405)
DNA (1086bp) protein (362aa)
Bacterial capsule synthesis protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XZN2_9PORP
Bacterial capsule synthesis protein {ECO:0000313|EMBL:CDD11682.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
capsular biosynthesis protein
L3_106_000M1_scaffold_523_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1402..2298)
DNA (897bp) protein (299aa)
Bifunctional protein FolD n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WXL1_9PORP
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase
L3_106_000M1_scaffold_523_3
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(2322..3647)
DNA (1326bp) protein (442aa)
Signal recognition particle protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WQN7_9PORP
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
signal recognition protein
L3_106_000M1_scaffold_523_4
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3747..5069)
DNA (1323bp) protein (441aa)
MATE efflux family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X5Z7_9PORP
MATE efflux family protein {ECO:0000313|EMBL:CDD11686.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
antiporter membrane protein
L3_106_000M1_scaffold_523_5
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5176..5526)
DNA (351bp) protein (117aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
aspartate alpha-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase n=7 Tax=Parabacteroides RepID=A7AC80_9PORP
L3_106_000M1_scaffold_523_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5645..6484)
DNA (840bp) protein (280aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Pantothenate synthetase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WKL0_9PORP
panC; pantoate--beta-alanine ligase
L3_106_000M1_scaffold_523_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6760..7434)
DNA (675bp) protein (225aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AC78_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87861.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_106_000M1_scaffold_523_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7484..8386)
DNA (903bp) protein (301aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AC77_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87860.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_106_000M1_scaffold_523_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8582..9382)
DNA (801bp) protein (267aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AC76_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87859.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_106_000M1_scaffold_523_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9686..10285
DNA (600bp) protein (200aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AC74_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN87857.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_106_000M1_scaffold_523_11
unknown

Not on your lists

comp(10790..11173)
DNA (384bp) protein (128aa)

This feature has no annotations

L3_106_000M1_scaffold_523_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11200..12540)
DNA (1341bp) protein (447aa)
Mannose-6-phosphate isomerase n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LGW7_PARD8
mannose-6-phosphate isomerase
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:ABR44931.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_106_000M1_scaffold_523_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12614..14086)
DNA (1473bp) protein (491aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00037581ED
Transposase family protein {ECO:0000313|EMBL:EXZ75714.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
hypothetical protein
L3_106_000M1_scaffold_523_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14070..15773)
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IMP8_9BACE
ABC transporter family protein {ECO:0000313|EMBL:EXZ75713.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
ABC transporter ATP-binding protein
L3_106_000M1_scaffold_523_15
Bacteroides coprophilus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15770..16252)
DNA (483bp) protein (161aa)
Peptidase S24-like protein n=1 Tax=Bacteroides coprophilus DSM 18228 = JCM 13818 RepID=S0FBL9_9BACE
Peptidase S24-like protein {ECO:0000313|EMBL:EEF77679.1}; TaxID=547042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprophilus DSM 18228 = JCM 13818.;"
hypothetical protein
L3_106_000M1_scaffold_523_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16789..17997)
DNA (1209bp) protein (403aa)
Outer membrane protein and related peptidoglycan-associated (Lipo)proteins n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6D2Z0_9BACE
OmpA family protein {ECO:0000313|EMBL:EXZ75708.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
Outer membrane protein and related peptidoglycan-associated (lipo)proteins
L3_106_000M1_scaffold_523_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18052..20649)
DNA (2598bp) protein (866aa)
CotH protein n=1 Tax=Prevotella sp. CAG:755 RepID=R5GR09_9BACT
CotH family protein {ECO:0000313|EMBL:EXZ75707.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
spore coat protein CotH
L3_106_000M1_scaffold_523_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20687..22834)
DNA (2148bp) protein (716aa)
Uncharacterized protein n=1 Tax=Bacteroides coprophilus DSM 18228 = JCM 13818 RepID=S0FEH9_9BACE
Putative lipoprotein {ECO:0000313|EMBL:EXZ75706.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
hypothetical protein
L3_106_000M1_scaffold_523_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22856..26113)
DNA (3258bp) protein (1086aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:770 RepID=R6T8H1_9BACE
Putative lipoprotein {ECO:0000313|EMBL:EXZ75705.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
hypothetical protein
L3_106_000M1_scaffold_523_20
unknown

Not on your lists

comp(26132..26311)
DNA (180bp) protein (60aa)

This feature has no annotations

L3_106_000M1_scaffold_523_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26340..28691)
DNA (2352bp) protein (784aa)
Capsular exopolysaccharide family n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6D2Z5_9BACE
Capsular exopolysaccharide family domain protein {ECO:0000313|EMBL:EXZ75703.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
capsular exopolysaccharide family
L3_106_000M1_scaffold_523_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28711..29499)
DNA (789bp) protein (263aa)
Periplasmic protein involved in polysaccharide export n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6D2Z6_9BACE
Polysaccharide biosynthesis/export family protein {ECO:0000313|EMBL:EXZ75702.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
Periplasmic protein involved in polysaccharide export
L3_106_000M1_scaffold_523_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29496..30398)
DNA (903bp) protein (301aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=Q8ABQ1_BACTN
Putative phosphoenolpyruvate carboxykinase {ECO:0000313|EMBL:EXZ75700.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
hypothetical protein
L3_106_000M1_scaffold_523_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30395..31486)
DNA (1092bp) protein (364aa)
Putative uncharacterized protein n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6D2Z8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXZ75699.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
hypothetical protein
L3_106_000M1_scaffold_523_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31533..32489
DNA (957bp) protein (319aa)
Sugar transferase domain protein {ECO:0000313|EMBL:EXZ75696.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
L3_106_000M1_scaffold_523_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32510..33646)
DNA (1137bp) protein (379aa)
Glycosyltransferase (EC:2.4.1.87)
Glycosyltransferase n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6D300_9BACE
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:EXZ75695.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
L3_106_000M1_scaffold_523_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33689..34930)
DNA (1242bp) protein (414aa)
Glycosyl transferase group 1 n=1 Tax=Prevotella sp. CAG:1185 RepID=R5M7H7_9BACT
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:EXZ75694.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
group 1 glycosyl transferase
L3_106_000M1_scaffold_523_28
Prevotella sp. CAG:255, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34927..36066)
DNA (1140bp) protein (380aa)
pglH; GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)-diNAcBac-PP-undecaprenol alpha-1,4-N-acetyl-D-galactosaminyltransferase (EC:2.4.1.292)
Glycoside transferase family 4 n=1 Tax=Prevotella sp. CAG:255 RepID=R5CNL4_9BACT
Glycoside transferase family 4 {ECO:0000313|EMBL:CCX68059.1}; TaxID=1262923 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:255.;"
L3_106_000M1_scaffold_523_29
Prevotella sp. CAG:755, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36133..36990)
DNA (858bp) protein (286aa)
Glycoside transferase family 14 n=1 Tax=Prevotella sp. CAG:755 RepID=R5GRG9_9BACT
Glycoside transferase family 14 {ECO:0000313|EMBL:CCY15166.1}; TaxID=1262935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:755.;"
Core-2/I-Branching enzyme
L3_106_000M1_scaffold_523_30
Prevotella sp. CAG:755, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36999..37922)
DNA (924bp) protein (308aa)
Putative capsular polysaccharide synthesis protein n=1 Tax=Prevotella sp. CAG:755 RepID=R5GCV0_9BACT
Putative capsular polysaccharide synthesis protein {ECO:0000313|EMBL:CCY15165.1}; TaxID=1262935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:755.;"
capsular polysaccharide synthesis protein
Displaying items 1-30 of 74 in total

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