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L3_106_000M1_scaffold_556

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_556_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..348)
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CC91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33803.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_106_000M1_scaffold_556_2
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1233..2507)
DNA (1275bp) protein (425aa)
UPF0597 protein HMPREF1085_00481 n=4 Tax=Clostridium RepID=R0AN16_9CLOT
UPF0597 protein HMPREF1097_00735 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
hypothetical protein
L3_106_000M1_scaffold_556_3
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2525..2992)
DNA (468bp) protein (156aa)
Endoribonuclease L-PSP n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EWA2_9FIRM
Endoribonuclease L-PSP {ECO:0000313|EMBL:EEQ62296.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
endoribonuclease L-PSP
L3_106_000M1_scaffold_556_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2996..3937)
DNA (942bp) protein (314aa)
Lipoate--protein ligase {ECO:0000256|SAAS:SAAS00026637}; EC=2.7.7.63 {ECO:0000256|SAAS:SAAS00026637};; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
lipoate-protein ligase A (EC:6.3.2.-)
Lipoate--protein ligase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UW38_CLOBO
L3_106_000M1_scaffold_556_5
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3944..5596)
DNA (1653bp) protein (551aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
lpdA; dihydrolipoyl dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EWA4_9FIRM
L3_106_000M1_scaffold_556_6
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5596..6039)
DNA (444bp) protein (148aa)
OsmC-like protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EWA5_9FIRM
OsmC-like protein {ECO:0000313|EMBL:EEQ62299.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
OsmC family protein
L3_106_000M1_scaffold_556_7
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6055..6438)
DNA (384bp) protein (128aa)
Cupin domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EWA6_9FIRM
Cupin domain protein {ECO:0000313|EMBL:EEQ62300.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
cupin domain-containing protein
L3_106_000M1_scaffold_556_8
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6435..7610)
DNA (1176bp) protein (392aa)
Aminotransferase, class V n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EWA7_9FIRM
Aminotransferase, class V {ECO:0000313|EMBL:EEQ62301.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
putative cysteine desulfurase/selenocysteine lyase
L3_106_000M1_scaffold_556_9
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7845..9926)
DNA (2082bp) protein (694aa)
Sigma-54 interaction domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EWB0_9FIRM
Sigma-54 interaction domain protein {ECO:0000313|EMBL:EEQ62304.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
sigma-54 dependent transcriptional regulator
L3_106_000M1_scaffold_556_10
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10174..11442)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9MAG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS67681.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
putative transporter
L3_106_000M1_scaffold_556_11
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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12108..12905
DNA (798bp) protein (266aa)
Hyalurononglucosaminidase {ECO:0000313|EMBL:EDY33980.1}; EC=3.2.1.35 {ECO:0000313|EMBL:EDY33980.1};; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Hyalurononglucosaminidase n=3 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CLB0_9FIRM
F5/8 type C domain protein
L3_106_000M1_scaffold_556_12
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12961..14001
DNA (1041bp) protein (347aa)
Uncharacterized protein n=3 Tax=Oscillibacter sp. 1-3 RepID=R9LVC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS62508.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
transposase
L3_106_000M1_scaffold_556_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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14360..15853
DNA (1494bp) protein (498aa)
Bacterial flagellin n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YWY0_9FIRM
Bacterial flagellin {ECO:0000313|EMBL:EHM38107.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
fliC; flagellin
L3_106_000M1_scaffold_556_14
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16023..18977
DNA (2955bp) protein (985aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LUN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS62505.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
fkbM; FkbM family methyltransferase
L3_106_000M1_scaffold_556_15
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18907..19431)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000363D3F1
Predicted membrane protein {ECO:0000313|EMBL:CEQ10383.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_106_000M1_scaffold_556_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19950..20714
DNA (765bp) protein (255aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CMZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54223.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_106_000M1_scaffold_556_17
unknown

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comp(21011..21463)
DNA (453bp) protein (151aa)

This feature has no annotations

L3_106_000M1_scaffold_556_18
S_Thermacetogenium_phaeum_55_64, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(23938..24492)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LQI1_THEPS
hypothetical protein
Tax=S_Thermacetogenium_phaeum_55_64
L3_106_000M1_scaffold_556_19

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24819..25061
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1RQ45_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC45649.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_106_000M1_scaffold_556_20
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25359..25778
DNA (420bp) protein (140aa)
Single-strand binding family protein n=2 Tax=Clostridium hathewayi RepID=D3ABN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61647.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
L3_106_000M1_scaffold_556_21
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25890..26675
DNA (786bp) protein (262aa)
Uncharacterized protein n=2 Tax=Clostridium hathewayi RepID=D3ABN5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD00782.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L3_106_000M1_scaffold_556_22
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26672..26989
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JPX9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95148.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_106_000M1_scaffold_556_23
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27043..28128
DNA (1086bp) protein (362aa)
Uncharacterized protein n=2 Tax=Clostridium hathewayi RepID=D3ABN6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD00783.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L3_106_000M1_scaffold_556_24
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28161..28997
DNA (837bp) protein (279aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R5FJT7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03903.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_106_000M1_scaffold_556_25
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28969..29550
DNA (582bp) protein (194aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R5F814_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03902.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
RNA polymerase sigma factor, sigma-70 family
L3_106_000M1_scaffold_556_26
unknown

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29568..29831
DNA (264bp) protein (88aa)

This feature has no annotations

L3_106_000M1_scaffold_556_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29828..30061
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33925.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_106_000M1_scaffold_556_28
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30252..30773
DNA (522bp) protein (174aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2DA34_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI78312.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_106_000M1_scaffold_556_29

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30763..31596
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NYR6_9FIRM
Uncultured bacterium extrachromosomal DNA RGI00017 {ECO:0000313|EMBL:CDL65502.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
L3_106_000M1_scaffold_556_30
unknown

Not on your lists

31598..32053
DNA (456bp) protein (152aa)

This feature has no annotations

Displaying items 1-30 of 85 in total

View Taxonomy