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L3_106_000M1_scaffold_560

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_560_1
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..958)
DNA (957bp) protein (319aa)
glutamate dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase n=2 Tax=Clostridium RepID=N9XB75_9CLOT
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
L3_106_000M1_scaffold_560_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1242..2144
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YXU2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12582.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
yybE1; HTH-type transcriptional regulator YybE
L3_106_000M1_scaffold_560_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2264..2878)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YKX3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12583.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
conserved hypothetical protein TIGR01440
L3_106_000M1_scaffold_560_4
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3124..3483
DNA (360bp) protein (120aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=N9YWD2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX96880.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
L3_106_000M1_scaffold_560_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3664..5079)
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XBH1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12585.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
transcriptional regulator
L3_106_000M1_scaffold_560_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5150..12190)
DNA (7041bp) protein (2347aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XB79_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12586.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Listeria/Bacterioides repeat protein
L3_106_000M1_scaffold_560_7
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12245..13024)
DNA (780bp) protein (260aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=A8RGT4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19383.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L3_106_000M1_scaffold_560_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13035..13598)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YKX8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12588.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L3_106_000M1_scaffold_560_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13708..15456)
DNA (1749bp) protein (583aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YWD8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12589.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L3_106_000M1_scaffold_560_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15591..16199)
DNA (609bp) protein (203aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9XBH7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12590.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L3_106_000M1_scaffold_560_11
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16356..16976)
DNA (621bp) protein (207aa)
Signal peptidase I n=3 Tax=Clostridium RepID=N9XB84_9CLOT
Signal peptidase I {ECO:0000313|EMBL:ENZ49423.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
sipW; signal peptidase
L3_106_000M1_scaffold_560_12
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16973..17149)
DNA (177bp) protein (59aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RGU2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX96888.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
L3_106_000M1_scaffold_560_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17650..18495)
DNA (846bp) protein (282aa)
Integrase n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YKY4_9CLOT
Integrase {ECO:0000313|EMBL:ENZ12593.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Site-specific recombinase XerD
L3_106_000M1_scaffold_560_14
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18906..19952)
DNA (1047bp) protein (349aa)
Beta-lactamase n=3 Tax=Clostridium RepID=N9YWE5_9CLOT
Beta-lactamase {ECO:0000313|EMBL:ENZ49426.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
6-aminohexanoate hydrolase
L3_106_000M1_scaffold_560_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20071..20562)
DNA (492bp) protein (164aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=A8RGU8_9CLOT
Acetyltransferase {ECO:0000313|EMBL:ENZ12595.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
acetyltransferase
L3_106_000M1_scaffold_560_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20844..22337)
DNA (1494bp) protein (498aa)
Inosine-5'-monophosphate dehydrogenase n=3 Tax=Clostridium RepID=N9XB87_9CLOT
Inosine-5'-monophosphate dehydrogenase {ECO:0000313|EMBL:ENZ12596.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
IMP dehydrogenase/GMP reductase
L3_106_000M1_scaffold_560_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22513..23037)
DNA (525bp) protein (175aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
dCTP deaminase (EC:3.5.4.13)
Deoxycytidine triphosphate deaminase n=6 Tax=Clostridium RepID=A8RGV0_9CLOT
L3_106_000M1_scaffold_560_18
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23191..23892)
DNA (702bp) protein (234aa)
HAD hydrolase, family IA n=2 Tax=Clostridium RepID=N9YKZ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX96894.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
HAD family hydrolase
L3_106_000M1_scaffold_560_19
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23904..24317)
DNA (414bp) protein (138aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=N9YWF1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX96895.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
L3_106_000M1_scaffold_560_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24425..25312)
DNA (888bp) protein (296aa)
Sugar kinase n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XBI8_9CLOT
Sugar kinase {ECO:0000313|EMBL:ENZ12600.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
sugar kinase
L3_106_000M1_scaffold_560_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25331..26119)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XB93_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12601.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
fructoselysine kinase
L3_106_000M1_scaffold_560_22
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26123..26563)
DNA (441bp) protein (147aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RGV7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19402.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
conserved hypothetical protein TIGR00149
L3_106_000M1_scaffold_560_23
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26605..27453)
DNA (849bp) protein (283aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9YKZ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12603.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L3_106_000M1_scaffold_560_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27505..29055)
DNA (1551bp) protein (517aa)
Carbohydrate kinase n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YWF9_9CLOT
Carbohydrate kinase {ECO:0000313|EMBL:ENZ12604.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Carbohydrate kinase, FGGY
L3_106_000M1_scaffold_560_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29069..29878)
DNA (810bp) protein (270aa)
BtpA family membrane complex biogenesis protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XBJ3_9CLOT
BtpA family membrane complex biogenesis protein {ECO:0000313|EMBL:ENZ12605.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
conserved hypothetical protein TIGR00259
L3_106_000M1_scaffold_560_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29880..30713)
DNA (834bp) protein (278aa)
Endonuclease n=3 Tax=Clostridium RepID=N9XB98_9CLOT
Endonuclease {ECO:0000313|EMBL:ENZ12606.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
endonuclease
L3_106_000M1_scaffold_560_27
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30817..32139)
DNA (1323bp) protein (441aa)
Anaerobic C4-dicarboxylate uptake (Dcu) family transporter n=4 Tax=Clostridium RepID=N9YXX6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX96903.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
dcuB; anaerobic C4-dicarboxylate transporter
L3_106_000M1_scaffold_560_28
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32496..33326)
DNA (831bp) protein (277aa)
Protein FrlC n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YL00_9CLOT
Protein FrlC {ECO:0000313|EMBL:ENZ12608.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L3_106_000M1_scaffold_560_29
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33486..34496)
DNA (1011bp) protein (337aa)
Phosphosugar isomerase n=3 Tax=Clostridium RepID=N9YWG6_9CLOT
Phosphosugar isomerase {ECO:0000313|EMBL:ENZ49441.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
phosphosugar isomerase
L3_106_000M1_scaffold_560_30
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34669..35382
DNA (714bp) protein (238aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RGW9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19412.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Transcriptional regulator, fadR family
Displaying items 1-30 of 66 in total

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