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L3_106_000M1_scaffold_574

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_574_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(252..1052)
DNA (801bp) protein (267aa)
thiD_2; phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SGY8_CLOSG
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:KIN80659.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_106_000M1_scaffold_574_2
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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comp(1061..2575)
DNA (1515bp) protein (505aa)
Glycosidase n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TG02_9FIRM
Glycosidase {ECO:0000313|EMBL:CDC71165.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
fructan beta-fructosidase
L3_106_000M1_scaffold_574_3
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2838..3803
DNA (966bp) protein (322aa)
Sporulation integral membrane protein YtvI n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A6T0_9CLOT
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:CCX37454.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
sporulation integral membrane protein YtvI
L3_106_000M1_scaffold_574_4
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3898..4854)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LYM1_CLOCD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV70009.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L3_106_000M1_scaffold_574_5
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(5014..6291)
DNA (1278bp) protein (426aa)
Alanine-glyoxylate amino-transferase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YRJ0_9FIRM
Alanine-glyoxylate amino-transferase {ECO:0000313|EMBL:CDD31206.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
putative aminotransferase MSMEG_6286/MSMEI_6121
L3_106_000M1_scaffold_574_6
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6550..7944)
DNA (1395bp) protein (465aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
asnS; asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A6S6_9CLOT
L3_106_000M1_scaffold_574_7
[Clostridium] celerecrescens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8103..8654)
DNA (552bp) protein (184aa)
GNAT family acetyltransferase n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RBY9_9BIFI
GNAT family acetyltransferase {ECO:0000313|EMBL:KEZ87692.1}; TaxID=29354 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] celerecrescens.;"
GNAT family acetyltransferase
L3_106_000M1_scaffold_574_8
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(8950..10071)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y8H5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD27564.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
L3_106_000M1_scaffold_574_9
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(10692..12152)
DNA (1461bp) protein (487aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
Nicotinate phosphoribosyltransferase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y5I4_9FIRM
putative nicotinate phosphoribosyltransferase
L3_106_000M1_scaffold_574_10
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12397..13419)
DNA (1023bp) protein (341aa)
Chlorophyll synthesis pathway bchC n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A1V8_9CLOT
Chlorophyll synthesis pathway bchC {ECO:0000313|EMBL:CCX36778.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
theronine dehydrogenase-like Zn-dependent dehydrogenase
L3_106_000M1_scaffold_574_11
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(13499..14947)
DNA (1449bp) protein (483aa)
Iron only hydrogenase large subunit C-terminal domain n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YFM2_9FIRM
Iron only hydrogenase large subunit C-terminal domain {ECO:0000313|EMBL:CDD30124.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
Iron only hydrogenase large subunit, C-terminal domain
L3_106_000M1_scaffold_574_12
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15054..16226)
DNA (1173bp) protein (391aa)
Stage II sporulation protein E (SpoIIE) n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A1B7_9CLOT
Stage II sporulation protein E (SpoIIE) {ECO:0000313|EMBL:CCX36780.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
Stage II sporulation protein E (SpoIIE).
L3_106_000M1_scaffold_574_13
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16219..17892)
DNA (1674bp) protein (558aa)
Putative PAS/PAC sensor protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5ABM5_9CLOT
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:CCX36781.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
fhmB; FhmB
L3_106_000M1_scaffold_574_14
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17915..18286)
DNA (372bp) protein (124aa)
Thioesterase superfamily n=1 Tax=Clostridium sp. CAG:58 RepID=R6RV13_9CLOT
Thioesterase superfamily {ECO:0000313|EMBL:CDC46866.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_106_000M1_scaffold_574_15
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(18415..18657)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y237_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD30128.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
L3_106_000M1_scaffold_574_16
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(18750..19409)
DNA (660bp) protein (220aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y888_9FIRM
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
redox-sensing transcriptional repressor Rex
L3_106_000M1_scaffold_574_17
Elusimicrobium minutum, Elusimicrobium, Elusimicrobiales, Elusimicrobia, Elusimicrobia, Bacteria

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comp(19574..20527)
DNA (954bp) protein (318aa)
Transcriptional regulator n=1 Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KCR6_ELUMP
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ACC98312.1}; TaxID=445932 species="Bacteria; Elusimicrobia; Elusimicrobia; Elusimicrobiales; Elusimicrobiaceae; Elusimicrobium.;" source="Elusimicrobium minutum (strain Pei191).;"
L3_106_000M1_scaffold_574_18
unknown

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comp(20650..20904)
DNA (255bp) protein (85aa)

This feature has no annotations

L3_106_000M1_scaffold_574_19
unknown

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comp(20888..21427)
DNA (540bp) protein (180aa)

This feature has no annotations

L3_106_000M1_scaffold_574_20
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21424..23100)
DNA (1677bp) protein (559aa)
DNA repair protein RecN n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A3S4_9CLOT
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
DNA repair protein RecN
L3_106_000M1_scaffold_574_21
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23102..23557)
DNA (456bp) protein (152aa)
Arginine repressor n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A8W0_9CLOT
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
transcriptional regulator, ArgR family
L3_106_000M1_scaffold_574_22
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23582..24430)
DNA (849bp) protein (283aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Predicted sugar kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=2 Tax=Clostridium RepID=A7VX37_9CLOT
L3_106_000M1_scaffold_574_23
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24436..25245)
DNA (810bp) protein (270aa)
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A358_9CLOT
Ribosomal RNA large subunit methyltransferase J {ECO:0000313|EMBL:CCX37495.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
hemolysin TlyA family protein
L3_106_000M1_scaffold_574_24
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25242..27134)
DNA (1893bp) protein (631aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A6W1_9CLOT
L3_106_000M1_scaffold_574_25
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(27137..27991)
DNA (855bp) protein (285aa)
methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YB41_9FIRM
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
L3_106_000M1_scaffold_574_26
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(27975..29078)
DNA (1104bp) protein (368aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YI87_9FIRM
L3_106_000M1_scaffold_574_27
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29097..30395)
DNA (1299bp) protein (433aa)
Peptidase, M16 family {ECO:0000313|EMBL:EJF40138.1}; EC=3.4.24.- {ECO:0000313|EMBL:EJF40138.1};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
Peptidase, M16 family n=1 Tax=Clostridium sp. MSTE9 RepID=J1H4K4_9CLOT
Predicted Zn-dependent peptidases
L3_106_000M1_scaffold_574_28
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(30392..31657)
DNA (1266bp) protein (422aa)
Peptidase M16 inactive domain protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZKY3_9FIRM
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:CDD31107.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
Predicted Zn-dependent peptidases
L3_106_000M1_scaffold_574_29
Eubacterium sp. CAG:581, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31860..32609)
DNA (750bp) protein (250aa)
Putative transmembrane protein n=1 Tax=Eubacterium sp. CAG:581 RepID=R7NSJ5_9FIRM
Putative transmembrane protein {ECO:0000313|EMBL:CDF15112.1}; TaxID=1262890 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:581.;"
L3_106_000M1_scaffold_574_30
unknown

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comp(32635..32826)
DNA (192bp) protein (64aa)

This feature has no annotations

Displaying items 1-30 of 66 in total

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