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L3_106_000M1_scaffold_581

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_581_1
unknown

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2..163
DNA (162bp) protein (54aa)

This feature has no annotations

L3_106_000M1_scaffold_581_2
unknown

Not on your lists

380..550
DNA (171bp) protein (57aa)

This feature has no annotations

L3_106_000M1_scaffold_581_3
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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624..1577
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K1K8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40126.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
L3_106_000M1_scaffold_581_4
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

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1738..2460
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6VCR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC92099.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
L3_106_000M1_scaffold_581_5
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2535..3215)
DNA (681bp) protein (227aa)
TIGR00266 family protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G1X4_9FIRM
TIGR00266 family protein {ECO:0000313|EMBL:EDR48362.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
conserved hypothetical protein TIGR00266
L3_106_000M1_scaffold_581_6
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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3314..3490
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WLT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07899.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L3_106_000M1_scaffold_581_7
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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3552..4172
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WE84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07715.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Uncharacterized metal-binding protein conserved in archaea
L3_106_000M1_scaffold_581_8
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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4366..4713
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5D8G3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX75099.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L3_106_000M1_scaffold_581_9
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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4734..5765
DNA (1032bp) protein (344aa)
Molybdopterin binding domain protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DGR3_9FIRM
Molybdopterin binding domain protein {ECO:0000313|EMBL:CCX75101.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
moeA2; molybdopterin biosynthesis protein MoeA2
L3_106_000M1_scaffold_581_10
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5826..6857
DNA (1032bp) protein (344aa)
Putative xanthine dehydrogenase accessory factor n=2 Tax=Dorea RepID=A6BKT1_9FIRM
Putative xanthine dehydrogenase accessory factor {ECO:0000313|EMBL:EDM61702.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L3_106_000M1_scaffold_581_11
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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6883..7848
DNA (966bp) protein (322aa)
Cyclic pyranopterin phosphate synthase {ECO:0000256|SAAS:SAAS00064088}; EC=4.1.99.18 {ECO:0000256|SAAS:SAAS00064088};; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Molybdenum cofactor biosynthesis protein A n=1 Tax=Dorea sp. CAG:105 RepID=R5D4L0_9FIRM
hypothetical protein
L3_106_000M1_scaffold_581_12
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7852..8784
DNA (933bp) protein (311aa)
Molybdenum cofactor synthesis domain protein n=2 Tax=Coprococcus RepID=C0B8F6_9FIRM
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:CDB84747.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
molybdenum cofactor synthesis domain-containing protein
L3_106_000M1_scaffold_581_13
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8920..9825
DNA (906bp) protein (302aa)
Putative molybdate-binding periplasmic protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JSC3_9FIRM
Putative molybdate-binding periplasmic protein {ECO:0000313|EMBL:CDE66498.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
molybdenum ABC transporter, periplasmic molybdate-binding protein
L3_106_000M1_scaffold_581_14
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9882..10586
DNA (705bp) protein (235aa)
Molybdate ABC transporter, permease protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6Q4_9FIRM
molybdate ABC transporter, permease protein
Molybdate ABC transporter, permease protein {ECO:0000313|EMBL:CBL26916.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L3_106_000M1_scaffold_581_15
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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10602..11078
DNA (477bp) protein (159aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DE34_9FIRM
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
molybdenum cofactor biosynthesis protein C
L3_106_000M1_scaffold_581_16
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11075..12130
DNA (1056bp) protein (352aa)
Molybdate ABC transporter permease protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DGT3_9FIRM
Molybdate ABC transporter permease protein {ECO:0000313|EMBL:CCX75131.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
ABC-type spermidine/putrescine transport systems, ATPase components
L3_106_000M1_scaffold_581_17
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12261..13595
DNA (1335bp) protein (445aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HEH0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF00218.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
transcriptional regulator
L3_106_000M1_scaffold_581_18
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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13682..15073
DNA (1392bp) protein (464aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Dorea sp. CAG:105 RepID=R5D7L4_9FIRM
L3_106_000M1_scaffold_581_19
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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15117..15806
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9MU10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS74575.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
L3_106_000M1_scaffold_581_20
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15796..17022
DNA (1227bp) protein (409aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C5A3_9CLOT
histidine kinase
L3_106_000M1_scaffold_581_21
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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16964..18001
DNA (1038bp) protein (346aa)
DNA double-strand break repair protein Mre11 n=1 Tax=Dorea longicatena CAG:42 RepID=R7G1M2_9FIRM
DNA double-strand break repair protein Mre11 {ECO:0000313|EMBL:CDE20668.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
DNA repair exonuclease
L3_106_000M1_scaffold_581_22
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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17998..19524
DNA (1527bp) protein (509aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9MUU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS74578.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L3_106_000M1_scaffold_581_23
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19627..19905)
DNA (279bp) protein (93aa)
Putative septation protein SpoVG n=2 Tax=Dorea RepID=A6BI62_9FIRM
Putative septation protein SpoVG {ECO:0000256|HAMAP-Rule:MF_00819}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Uncharacterized protein, involved in the regulation of septum location
L3_106_000M1_scaffold_581_24
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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20218..21597
DNA (1380bp) protein (460aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BI65_9FIRM
L3_106_000M1_scaffold_581_25
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21724..22770
DNA (1047bp) protein (349aa)
DnaD domain protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C589_9CLOT
DnaD domain protein {ECO:0000313|EMBL:EEG72626.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
DnaD and phage-associated domain
L3_106_000M1_scaffold_581_26
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22816..23805
DNA (990bp) protein (330aa)
Putative DNA replication protein DnaC n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C590_9CLOT
Putative DNA replication protein DnaC {ECO:0000313|EMBL:EEG72627.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
replicative DNA helicase loader DnaI
L3_106_000M1_scaffold_581_27
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23825..25015
DNA (1191bp) protein (397aa)
Ribose-phosphate diphosphokinase {ECO:0000313|EMBL:EEG72628.1}; EC=2.7.6.1 {ECO:0000313|EMBL:EEG72628.1};; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate diphosphokinase n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C591_9CLOT
L3_106_000M1_scaffold_581_28
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25090..25761)
DNA (672bp) protein (224aa)
RNA pseudouridine synthase {ECO:0000313|EMBL:EDS06879.1}; EC=5.4.99.- {ECO:0000313|EMBL:EDS06879.1};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.12 5.4.99.-)
RNA pseudouridine synthase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NEU2_CLOSV
L3_106_000M1_scaffold_581_29
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26055..26807
DNA (753bp) protein (251aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=B0NFD3_CLOSV
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS06563.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
ABC transporter
L3_106_000M1_scaffold_581_30
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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26839..27756
DNA (918bp) protein (306aa)
Ribose transport system permease protein RbsC n=2 Tax=Clostridiales RepID=B0NFD2_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN32516.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
inner-membrane translocator
Displaying items 1-30 of 76 in total

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