ggKbase home page

L3_106_000M1_scaffold_602

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_602_1
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..208
DNA (207bp) protein (69aa)
Integrase core domain protein n=2 Tax=Clostridium sp. CAG:169 RepID=R6BQ49_9CLOT
Integrase core domain protein {ECO:0000313|EMBL:CDA62191.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
putative transposase
L3_106_000M1_scaffold_602_2
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

308..994
DNA (687bp) protein (229aa)
Two-component system, LytT family, response regulator n=1 Tax=Clostridium sp. ASF502 RepID=N2A6P5_9CLOT
Two-component system, LytT family, response regulator {ECO:0000313|EMBL:EMZ24997.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
Response regulator of the LytR/AlgR family
L3_106_000M1_scaffold_602_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

991..2310
DNA (1320bp) protein (440aa)
Uncharacterized protein n=3 Tax=Eubacterium RepID=R6TWZ3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK91640.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_106_000M1_scaffold_602_4
unknown

Not on your lists

2826..3506
DNA (681bp) protein (227aa)

This feature has no annotations

L3_106_000M1_scaffold_602_5
Myroides profundi, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3503..5161
DNA (1659bp) protein (553aa)
Uncharacterized protein n=1 Tax=Fusobacterium nucleatum subsp. animalis 4_8 RepID=R9RA17_FUSNU
ABC-type multidrug transport system, ATPase and permease component
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:AJH14096.1}; TaxID=480520 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides profundi.;"
L3_106_000M1_scaffold_602_6
Oceanobacillus iheyensis, Oceanobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5151..6794
DNA (1644bp) protein (548aa)
multidrug ABC transporter ATP-binding protein n=1 Tax=Bacillus sp. 10403023 RepID=UPI000287FD46
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAC12856.1}; TaxID=221109 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Oceanobacillus.;" source="Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 /; HTE831).;"
L3_106_000M1_scaffold_602_7
unknown

Not on your lists

7737..7931
DNA (195bp) protein (65aa)

This feature has no annotations

L3_106_000M1_scaffold_602_8
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7945..8520)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A958_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX38414.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
hypothetical protein
L3_106_000M1_scaffold_602_9
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8538..9869)
DNA (1332bp) protein (444aa)
MATE efflux family protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LCT7_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EET61751.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
MATE efflux family protein
L3_106_000M1_scaffold_602_10
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10252..10548
DNA (297bp) protein (99aa)
Oxaloacetate decarboxylase gamma chain {ECO:0000256|RuleBase:RU004278}; EC=4.1.1.3 {ECO:0000256|RuleBase:RU004278};; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
Oxaloacetate decarboxylase gamma chain n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A697_9CLOT
L3_106_000M1_scaffold_602_11
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10591..10947
DNA (357bp) protein (119aa)
accB; biotin carboxyl carrier protein of Methylmalonyl-CoA decarboxylase (EC:4.1.1.41)
Glutaconyl-CoA decarboxylase subunit gamma n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CQR8_9FIRM
Glutaconyl-CoA decarboxylase subunit gamma {ECO:0000313|EMBL:CDA73861.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
L3_106_000M1_scaffold_602_12
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11001..12197
DNA (1197bp) protein (399aa)
sodium ion-translocating decarboxylase, beta subunit (EC:4.1.1.3)
Sodium ion-translocating decarboxylase beta subunit n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AGF3_9CLOT
Sodium ion-translocating decarboxylase beta subunit {ECO:0000313|EMBL:CCX38431.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L3_106_000M1_scaffold_602_13
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12228..13676
DNA (1449bp) protein (483aa)
Na(+)-transporting decarboxylase carboxyltransferase (EC:4.1.1.-)
Na(+)-transporting decarboxylase carboxyltransferase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5ABJ2_9CLOT
Na(+)-transporting decarboxylase carboxyltransferase {ECO:0000313|EMBL:CCX38432.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L3_106_000M1_scaffold_602_14
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

14050..15318
DNA (1269bp) protein (423aa)
alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R7Z2_9FIRM
Alpha-L-fucosidase {ECO:0000313|EMBL:CCZ34889.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L3_106_000M1_scaffold_602_15
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

15339..16238
DNA (900bp) protein (300aa)
Alpha/beta hydrolase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0Y4_9FIRM
Alpha/beta hydrolase {ECO:0000313|EMBL:CDB02696.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
alpha/beta hydrolase
L3_106_000M1_scaffold_602_16
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

16301..17017
DNA (717bp) protein (239aa)
RadC-like JAB domain protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YH91_9FIRM
RadC-like JAB domain protein {ECO:0000313|EMBL:CDD30744.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
DNA repair protein RadC
L3_106_000M1_scaffold_602_17
unknown

Not on your lists

17029..17661
DNA (633bp) protein (211aa)

This feature has no annotations

L3_106_000M1_scaffold_602_18
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17787..19760
DNA (1974bp) protein (658aa)
UvrABC system protein B n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A479_9CLOT
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
Excinuclease ABC subunit B
L3_106_000M1_scaffold_602_19
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19771..20556
DNA (786bp) protein (262aa)
GCN5-related N-acetyltransferase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A9D9_9CLOT
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CCX37697.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
hypothetical protein
L3_106_000M1_scaffold_602_20
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20563..23418
DNA (2856bp) protein (952aa)
excinuclease ABC subunit A n=1 Tax=Clostridium sporosphaeroides RepID=UPI000382CFCA
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
uvrA; UvrABC system protein A
L3_106_000M1_scaffold_602_21
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

23636..24556
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y603_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD31373.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
L3_106_000M1_scaffold_602_22
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

24549..25208
DNA (660bp) protein (220aa)
DnaJ domain protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZLN8_9FIRM
DnaJ domain protein {ECO:0000313|EMBL:CDD31372.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
heat shock protein DnaJ domain-containing protein
L3_106_000M1_scaffold_602_23
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

25221..25757
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YS21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD31371.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
L3_106_000M1_scaffold_602_24
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25812..27005)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A9I8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37757.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L3_106_000M1_scaffold_602_25
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27020..28144)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A4D5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37758.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
hypothetical protein
L3_106_000M1_scaffold_602_26
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28144..29088)
DNA (945bp) protein (315aa)
Magnesium chelatase subunit ChII family protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A7B0_9CLOT
Magnesium chelatase subunit ChII family protein {ECO:0000313|EMBL:CCX37759.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
ATPase
L3_106_000M1_scaffold_602_27
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

29492..30379
DNA (888bp) protein (296aa)
SIS domain protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YBR6_9FIRM
SIS domain protein {ECO:0000313|EMBL:CDD31370.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
transcriptional regulator, RpiR family
L3_106_000M1_scaffold_602_28
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30372..31598
DNA (1227bp) protein (409aa)
Flavoprotein family protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AE80_9CLOT
Flavoprotein family protein {ECO:0000313|EMBL:CCX37691.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
conserved hypothetical protein TIGR00275
L3_106_000M1_scaffold_602_29
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31628..32293
DNA (666bp) protein (222aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
cmk; Cytidylate kinase (EC:2.7.4.25)
Cytidylate kinase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A3M2_9CLOT
L3_106_000M1_scaffold_602_30
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

32286..32954
DNA (669bp) protein (223aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
Acyltransferase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6ZKV1_9FIRM
1-acyl-sn-glycerol-3-phosphate acyltransferase
Displaying items 1-30 of 69 in total

View Taxonomy