ggKbase home page

L3_106_000M1_scaffold_620

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_620_1
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..351
DNA (351bp) protein (117aa)
ROK family protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FQ79_9FIRM
ROK family protein {ECO:0000313|EMBL:EEG95279.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
ROK family protein
L3_106_000M1_scaffold_620_2
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

371..1375
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I1F5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30561.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
G-D-S-L family lipolytic protein
L3_106_000M1_scaffold_620_3
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1386..2246
DNA (861bp) protein (287aa)
Transcriptional regulator RpiR family n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I0S4_9FIRM
Transcriptional regulator RpiR family {ECO:0000313|EMBL:CCY30562.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
transcriptional regulator
L3_106_000M1_scaffold_620_4
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2438..4270
DNA (1833bp) protein (611aa)
Glycoside hydrolase family 20 catalytic core n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HLT3_9FIRM
Glycoside hydrolase family 20 catalytic core {ECO:0000313|EMBL:CCY30563.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
glycoside hydrolase family protein
L3_106_000M1_scaffold_620_5
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4329..5648
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HR20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30564.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family
L3_106_000M1_scaffold_620_6
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5729..6625
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HLH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30565.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family
L3_106_000M1_scaffold_620_7
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6618..7457
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I1F8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30566.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family
L3_106_000M1_scaffold_620_8
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7461..9602
DNA (2142bp) protein (714aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I0S7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30567.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_106_000M1_scaffold_620_9
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9616..11115
DNA (1500bp) protein (500aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HLT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30568.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_106_000M1_scaffold_620_10
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11108..12082
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HR23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30569.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
PHP domain-containing protein
L3_106_000M1_scaffold_620_11
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12347..14743
DNA (2397bp) protein (799aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0G041_9FIRM
Glycosyl hydrolase family 3 N-terminal domain protein {ECO:0000313|EMBL:EEG91911.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_106_000M1_scaffold_620_12
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14866..15447
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I1G2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30571.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L3_106_000M1_scaffold_620_13
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15529..16317
DNA (789bp) protein (263aa)
Glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
Glycerophosphodiester phosphodiesterase family protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0G043_9FIRM
Glycerophosphodiester phosphodiesterase family protein {ECO:0000313|EMBL:EEG91913.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_106_000M1_scaffold_620_14
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16335..17396
DNA (1062bp) protein (354aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0G044_9FIRM
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:EEG91914.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
lysophospholipase L2 PLDB, hydrolase of alpha/beta superfamily protein
L3_106_000M1_scaffold_620_15
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17350..18636
DNA (1287bp) protein (429aa)
Transporter, major facilitator family protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0G045_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEG91915.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_106_000M1_scaffold_620_16
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18739..19707
DNA (969bp) protein (323aa)
Putative Phosphate-binding protein PstS 2 n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0G046_9FIRM
Putative Phosphate-binding protein PstS 2 {ECO:0000313|EMBL:EEG91916.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1)
L3_106_000M1_scaffold_620_17
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19783..19905
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0G047_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG91917.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_106_000M1_scaffold_620_18
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19902..20759
DNA (858bp) protein (286aa)
Phosphate ABC transporter, permease protein PstC n=2 Tax=Roseburia RepID=C0G048_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30576.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1)
L3_106_000M1_scaffold_620_19
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20767..21648
DNA (882bp) protein (294aa)
Phosphate ABC transporter, permease protein PstA n=2 Tax=Roseburia RepID=C0G049_9FIRM
Phosphate ABC transporter, permease protein PstA {ECO:0000313|EMBL:EEG91919.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1)
L3_106_000M1_scaffold_620_20
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21682..22434
DNA (753bp) protein (251aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) (EC:3.6.3.27)
Phosphate ABC transporter, ATP-binding protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0G050_9FIRM
L3_106_000M1_scaffold_620_21
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22459..23115
DNA (657bp) protein (219aa)
Phosphate-specific transport system accessory protein PhoU n=2 Tax=Roseburia RepID=C0G051_9FIRM
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
phosphate uptake regulator PhoU
L3_106_000M1_scaffold_620_22
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23286..25046
DNA (1761bp) protein (587aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HLH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30580.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Na/Pi-cotransporter
L3_106_000M1_scaffold_620_23
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25177..25848
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I1H0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30581.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_106_000M1_scaffold_620_24
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25927..27219
DNA (1293bp) protein (431aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Signal transduction histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0G054_9FIRM
L3_106_000M1_scaffold_620_25
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27454..30750
DNA (3297bp) protein (1099aa)
SNF2 family N-terminal domain protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FTZ5_9FIRM
SNF2 family N-terminal domain protein {ECO:0000313|EMBL:EEG93965.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
helicase SNF2 family protein
L3_106_000M1_scaffold_620_26
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31110..31763
DNA (654bp) protein (218aa)
F0F1 ATP synthase subunit A (EC:3.6.3.14)
ATP synthase subunit a n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I0U1_9FIRM
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L3_106_000M1_scaffold_620_27
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31812..32036
DNA (225bp) protein (75aa)
ATP synthase F0, C subunit n=2 Tax=Roseburia RepID=C0FTZ3_9FIRM
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
ATP synthase F0 subunit C
L3_106_000M1_scaffold_620_28
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32056..32562
DNA (507bp) protein (169aa)
ATP synthase subunit b n=2 Tax=Roseburia RepID=C0FTZ2_9FIRM
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
ATP synthase F0 subunit B
L3_106_000M1_scaffold_620_29
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32543..33046
DNA (504bp) protein (168aa)
ATP synthase subunit delta n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HLI5_9FIRM
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
ATP synthase F1 subunit delta
L3_106_000M1_scaffold_620_30
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33051..34553
DNA (1503bp) protein (501aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
ATP synthase subunit alpha n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I1H7_9FIRM
ATP synthase F1 subunit alpha
Displaying items 1-30 of 57 in total

View Taxonomy