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L3_106_000M1_scaffold_633

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_633_1
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(383..2623)
DNA (2241bp) protein (747aa)
Sulfate permease n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EZR9_9FIRM
Sulfate permease {ECO:0000313|EMBL:EEG35246.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Sulfate permease and related transporters (MFS superfamily)
L3_106_000M1_scaffold_633_2
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2768..3220)
DNA (453bp) protein (151aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C0EZR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB17474.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L3_106_000M1_scaffold_633_3
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3958..5859
DNA (1902bp) protein (634aa)
Oligopeptide transporter, OPT family n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EZR7_9FIRM
Oligopeptide transporter, OPT family {ECO:0000313|EMBL:EEG35244.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
oligopeptide transporter family protein
L3_106_000M1_scaffold_633_4
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5992..6345
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EZR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG35243.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Coenzyme PQQ synthesis protein D (PqqD).
L3_106_000M1_scaffold_633_5
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6417..6782
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EZR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG35242.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein
L3_106_000M1_scaffold_633_6
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6979..7563)
DNA (585bp) protein (195aa)
Ribosomal protein L25, Ctc-form n=2 Tax=Eubacterium RepID=C0EZR4_9FIRM
50S ribosomal protein L25 {ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|SAAS:SAAS00023360}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
LSU ribosomal protein L25P
L3_106_000M1_scaffold_633_7
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8012..8695)
DNA (684bp) protein (228aa)
Cyclic nucleotide-binding domain protein n=2 Tax=Eubacterium RepID=C0EZR3_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:CDB17480.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
L3_106_000M1_scaffold_633_8
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8787..9122
DNA (336bp) protein (112aa)
Cupin domain protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EZR2_9FIRM
Cupin domain protein {ECO:0000313|EMBL:EEG35239.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Cupin domain.
L3_106_000M1_scaffold_633_9
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9158..10807
DNA (1650bp) protein (550aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Hydroxylamine reductase n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GTR0_9FIRM
hybrid cluster protein
L3_106_000M1_scaffold_633_10
unknown

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comp(10808..11011)
DNA (204bp) protein (68aa)

This feature has no annotations

L3_106_000M1_scaffold_633_11
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11162..12454
DNA (1293bp) protein (431aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Homoserine dehydrogenase n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GQK2_9FIRM
homoserine dehydrogenase
L3_106_000M1_scaffold_633_12
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12575..13996
DNA (1422bp) protein (474aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=2 Tax=Eubacterium RepID=C0EZQ8_9FIRM
L3_106_000M1_scaffold_633_13
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14267..15220)
DNA (954bp) protein (318aa)
CobW/P47K family protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EZQ6_9FIRM
CobW/P47K family protein {ECO:0000313|EMBL:EEG35233.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Putative GTPases (G3E family)
L3_106_000M1_scaffold_633_14
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15488..15862
DNA (375bp) protein (125aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C0EZQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB17488.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L3_106_000M1_scaffold_633_15
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15882..16688)
DNA (807bp) protein (269aa)
Putative DNA metabolism protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EZQ4_9FIRM
Putative DNA metabolism protein {ECO:0000313|EMBL:EEG35231.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein
L3_106_000M1_scaffold_633_16
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16685..18379)
DNA (1695bp) protein (565aa)
Radical SAM domain protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6FZN6_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:CDB17490.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Predicted DNA-binding protein with the Helix-hairpin-helix motif
L3_106_000M1_scaffold_633_17
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18566..20611)
DNA (2046bp) protein (682aa)
Efflux ABC transporter, permease protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ETN2_9FIRM
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EEG37337.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
lipoprotein release ABC transporter permease
L3_106_000M1_scaffold_633_18
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20604..21371)
DNA (768bp) protein (256aa)
Putative bacteriocin export ABC transporter, lactococcin 972 group n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ETN3_9FIRM
Putative bacteriocin export ABC transporter, lactococcin 972 group {ECO:0000313|EMBL:EEG37338.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein
L3_106_000M1_scaffold_633_19
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21495..22532)
DNA (1038bp) protein (346aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ETN4_9FIRM
signal transduction histidine kinase
L3_106_000M1_scaffold_633_20
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22548..23222)
DNA (675bp) protein (225aa)
Response regulator receiver domain protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ETN5_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEG37340.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
two component transcriptional regulator, winged helix family
L3_106_000M1_scaffold_633_21
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23313..24224)
DNA (912bp) protein (304aa)
LysR substrate binding domain protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ETN6_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:EEG37341.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
LysR family transcriptional regulator
L3_106_000M1_scaffold_633_22
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24568..25596
DNA (1029bp) protein (343aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
selenophosphate synthase (EC:2.7.9.3)
Selenide, water dikinase n=2 Tax=Eubacterium RepID=C0ETN7_9FIRM
L3_106_000M1_scaffold_633_23
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25797..26429
DNA (633bp) protein (211aa)
Selenium metabolism protein YedF n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GTV0_9FIRM
Selenium metabolism protein YedF {ECO:0000313|EMBL:CDB17497.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
selenium metabolism protein YedF
L3_106_000M1_scaffold_633_24
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26552..26791
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6FWG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB17498.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Protein of unknown function (DUF3343).
L3_106_000M1_scaffold_633_25
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26975..27748
DNA (774bp) protein (258aa)
Putative CoA-substrate-specific enzyme activase n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ETP0_9FIRM
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:EEG37345.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
activator of 2-hydroxyglutaryl-CoA dehydratase
L3_106_000M1_scaffold_633_26
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27793..28125
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6FZS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB17500.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L3_106_000M1_scaffold_633_27
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28234..29559)
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G881_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB17501.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L3_106_000M1_scaffold_633_28
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29630..30484)
DNA (855bp) protein (285aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C0ETP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG37348.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein
L3_106_000M1_scaffold_633_29
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30674..31060)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6FWH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB17503.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Protein of unknown function (DUF2500).
L3_106_000M1_scaffold_633_30
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31321..32514)
DNA (1194bp) protein (398aa)
translation elongation factor 1A (EF-1A/EF-Tu) (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ETQ9_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Displaying items 1-30 of 60 in total

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