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L3_106_000M1_scaffold_645

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_645_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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222..1034
DNA (813bp) protein (271aa)
Predicted xylanase/chitin deacetylase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KMK3_9FIRM
Predicted xylanase/chitin deacetylase
Predicted xylanase/chitin deacetylase {ECO:0000313|EMBL:CBL08105.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_106_000M1_scaffold_645_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1046..1561)
DNA (516bp) protein (172aa)
Glycopeptide antibiotics resistance protein n=4 Tax=Roseburia RepID=D4KMK2_9FIRM
Glycopeptide antibiotics resistance protein
Glycopeptide antibiotics resistance protein {ECO:0000313|EMBL:CBL08104.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_106_000M1_scaffold_645_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1527..2255)
DNA (729bp) protein (243aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=2 Tax=Roseburia intestinalis RepID=D4KMK1_9FIRM
L3_106_000M1_scaffold_645_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2412..3251)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G738_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV02403.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_106_000M1_scaffold_645_5
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3255..3836)
DNA (582bp) protein (194aa)
RNA polymerase sigma factor n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B797_9FIRM
RNA polymerase sigma factor {ECO:0000313|EMBL:CDA56814.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
RNA polymerase sigma-70 factor, ECF subfamily protein
L3_106_000M1_scaffold_645_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3873..5426)
DNA (1554bp) protein (518aa)
Serine proteinase inhibitor n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G740_9FIRM
Serine proteinase inhibitor {ECO:0000313|EMBL:EEV02405.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Serine protease inhibitor
L3_106_000M1_scaffold_645_7
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5521..5958)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BCH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA56811.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L3_106_000M1_scaffold_645_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6059..6190)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G742_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV02407.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_106_000M1_scaffold_645_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6187..6729)
DNA (543bp) protein (181aa)
Predicted xylanase/chitin deacetylase n=2 Tax=Roseburia intestinalis RepID=D4KZ70_9FIRM
Predicted xylanase/chitin deacetylase
Predicted xylanase/chitin deacetylase {ECO:0000313|EMBL:CBL12660.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_106_000M1_scaffold_645_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7100..7741)
DNA (642bp) protein (214aa)
Spore germination protein (Amino acid permease) n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G761_9FIRM
Spore germination protein (Amino acid permease) {ECO:0000313|EMBL:EEV02265.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Spore germination protein.
L3_106_000M1_scaffold_645_11
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7738..8829)
DNA (1092bp) protein (364aa)
Spore germination protein-like protein YndE n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T419_ROSHA
spore germination protein-like protein YndE
Spore germination protein-like protein YndE {ECO:0000313|EMBL:AEN97464.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_106_000M1_scaffold_645_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8829..9521)
DNA (693bp) protein (231aa)
Bacillus/Clostridium GerA spore germination protein n=4 Tax=Roseburia RepID=D4KZ56_9FIRM
Bacillus/Clostridium GerA spore germination protein.
Bacillus/Clostridium GerA spore germination protein {ECO:0000313|EMBL:CBL08085.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_106_000M1_scaffold_645_13
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9539..13018)
DNA (3480bp) protein (1160aa)
Beta-galactosidase n=1 Tax=Roseburia sp. CAG:100 RepID=R7R9H3_9FIRM
Beta-galactosidase {ECO:0000313|EMBL:CDF46521.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
glycoside hydrolase
L3_106_000M1_scaffold_645_14
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13077..13889)
DNA (813bp) protein (271aa)
xynZ1; endo-1,4-beta-xylanase Z (EC:3.2.1.8)
Esterase n=1 Tax=Clostridium sp. CAG:253 RepID=R6M9R1_9CLOT
Esterase {ECO:0000313|EMBL:CCZ39603.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
L3_106_000M1_scaffold_645_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13900..15606)
DNA (1707bp) protein (569aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G5F7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV02927.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Lysophospholipase L1 and related esterases
L3_106_000M1_scaffold_645_16
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15633..18494)
DNA (2862bp) protein (954aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BL31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA54022.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L3_106_000M1_scaffold_645_17
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18491..19141)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6APT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA54023.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Predicted integral membrane protein
L3_106_000M1_scaffold_645_18
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19209..20696)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AYU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA54024.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
sugar ABC transporter substrate-binding protein
L3_106_000M1_scaffold_645_19
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20769..21785)
DNA (1017bp) protein (339aa)
Sugar ABC transporter permease n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6ASU6_9FIRM
Sugar ABC transporter permease {ECO:0000313|EMBL:CDA54025.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
sugar ABC transporter permease
L3_106_000M1_scaffold_645_20
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21778..22683)
DNA (906bp) protein (302aa)
Putative ABC transporter permease protein YesP n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B524_9FIRM
Putative ABC transporter permease protein YesP {ECO:0000313|EMBL:CDA54026.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
sugar ABC transporter permease
L3_106_000M1_scaffold_645_21
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22708..25275)
DNA (2568bp) protein (856aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BL34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA54027.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L3_106_000M1_scaffold_645_22
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25298..25954)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6APU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA54028.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L3_106_000M1_scaffold_645_23
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25973..27484)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AYU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA54029.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
NHL repeat-containing protein
L3_106_000M1_scaffold_645_24
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27502..28362)
DNA (861bp) protein (287aa)
Putative ABC-type sugar transport system permease component n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6ASV0_9FIRM
Putative ABC-type sugar transport system permease component {ECO:0000313|EMBL:CDA54030.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
sugar ABC transporter permease
L3_106_000M1_scaffold_645_25
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28364..29302)
DNA (939bp) protein (313aa)
Putative ABC-type sugar transport system permease component n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B529_9FIRM
Putative ABC-type sugar transport system permease component {ECO:0000313|EMBL:CDA54031.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
sugar ABC transporter permease
L3_106_000M1_scaffold_645_26
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29315..32221)
DNA (2907bp) protein (969aa)
Putative bacterial extracellular solute-binding protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BL37_9FIRM
Putative bacterial extracellular solute-binding protein {ECO:0000313|EMBL:CDA54032.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
sugar ABC transporter substrate-binding protein
L3_106_000M1_scaffold_645_27
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32572..33501
DNA (930bp) protein (310aa)
Transcriptional regulator AraC family n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6APU8_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDA54033.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
AraC family transcriptional regulator
L3_106_000M1_scaffold_645_28
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33508..35070)
DNA (1563bp) protein (521aa)
putative beta-xylosidase (EC:3.2.1.37)
CHU large protein candidate polyfunctional acetylxylan esterase/B-xylosidase/a-L-arabinofuranosidase CBM9 module Glycoside Hydrolase family protein and Carbohydrate Esterase Family 6 protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AYU9_9FIRM
CHU large protein candidate polyfunctional acetylxylan esterase/B-xylosidase/a-L-arabinofuranosidase CBM9 module Glycoside Hydrolase family protein and Carbohydrate Esterase Family 6 protein {ECO:0000313|EMBL:CDA54034.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_106_000M1_scaffold_645_29
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35042..36463)
DNA (1422bp) protein (474aa)
xsa43A; xylosidase/arabinofuranosidase (EC:3.2.1.55)
Endo-1 4-beta-xylanase D n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6ASV2_9FIRM
Endo-1 4-beta-xylanase D {ECO:0000313|EMBL:CDA54035.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_106_000M1_scaffold_645_30
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36558..37460)
DNA (903bp) protein (301aa)
Lipoprotein releasing system ATP-binding protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B534_9FIRM
Lipoprotein releasing system ATP-binding protein {ECO:0000313|EMBL:CDA54036.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
ABC transporter
Displaying items 1-30 of 55 in total

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