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L3_106_000M1_scaffold_661

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_661_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..534
DNA (534bp) protein (178aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26203.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Site-specific recombinase XerD
L3_106_000M1_scaffold_661_2
unknown

Not on your lists

comp(849..1034)
DNA (186bp) protein (62aa)

This feature has no annotations

L3_106_000M1_scaffold_661_3
unknown

Not on your lists

comp(1003..1158)
DNA (156bp) protein (52aa)

This feature has no annotations

L3_106_000M1_scaffold_661_4
unknown

Not on your lists

comp(1151..1468)
DNA (318bp) protein (106aa)

This feature has no annotations

L3_106_000M1_scaffold_661_5
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

1807..2043
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EHT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX91968.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
hypothetical protein predicted by Glimmer/Critica
L3_106_000M1_scaffold_661_6
Thermoanaerobacter ethanolicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2143..2355)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Thermoanaerobacter ethanolicus CCSD1 RepID=C7ISQ5_THEET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU62245.1}; TaxID=589861 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter ethanolicus CCSD1.;"
L3_106_000M1_scaffold_661_7
unknown

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comp(2367..3287)
DNA (921bp) protein (307aa)

This feature has no annotations

L3_106_000M1_scaffold_661_8
unknown

Not on your lists

comp(3295..3510)
DNA (216bp) protein (72aa)

This feature has no annotations

L3_106_000M1_scaffold_661_9
unknown

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comp(3525..4097)
DNA (573bp) protein (191aa)

This feature has no annotations

L3_106_000M1_scaffold_661_10
unknown

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comp(4158..4367)
DNA (210bp) protein (70aa)

This feature has no annotations

L3_106_000M1_scaffold_661_11
Synergistes sp. 3_1_syn1, Synergistes, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(4521..6122)
DNA (1602bp) protein (534aa)
Phage/plasmid primase, P4 family domain-containing protein n=1 Tax=Synergistes sp. 3_1_syn1 RepID=G9PTB0_9BACT
Phage/plasmid primase, P4 family domain-containing protein {ECO:0000313|EMBL:EHL69847.1}; TaxID=457415 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Synergistes.;" source="Synergistes sp. 3_1_syn1.;"
D5-like N-terminal domain protein
L3_106_000M1_scaffold_661_12
unknown

Not on your lists

comp(6263..6460)
DNA (198bp) protein (66aa)

This feature has no annotations

L3_106_000M1_scaffold_661_13
Streptococcus agalactiae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6655..7287
DNA (633bp) protein (211aa)
XRE family transcriptional regulator n=1 Tax=Streptococcus agalactiae GB00300 RepID=S8V5Q6_STRAG
XRE family transcriptional regulator {ECO:0000313|EMBL:EPU98761.1}; TaxID=1154915 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus agalactiae GB00300.;"
5; helix-turn-helix family protein
L3_106_000M1_scaffold_661_14
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

7259..8647
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y173_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD29813.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
site-specific recombinase XerD
L3_106_000M1_scaffold_661_15
unknown

Not on your lists

comp(9208..9519)
DNA (312bp) protein (104aa)

This feature has no annotations

L3_106_000M1_scaffold_661_16
unknown

Not on your lists

comp(9519..9743)
DNA (225bp) protein (75aa)

This feature has no annotations

L3_106_000M1_scaffold_661_17
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9736..10620)
DNA (885bp) protein (295aa)
Uncharacterized protein {ECO:0000313|EMBL:EXM38464.1}; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;"
L3_106_000M1_scaffold_661_18
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10617..11180)
DNA (564bp) protein (188aa)
Metallophosphoesterase n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SUI0_SYNGF
Uncharacterized protein {ECO:0000313|EMBL:KJS18763.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
metallophosphoesterase
L3_106_000M1_scaffold_661_19
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11177..12421)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TQY2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC70321.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
L3_106_000M1_scaffold_661_20
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12402..12764)
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JT44_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96263.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L3_106_000M1_scaffold_661_21
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12761..13480)
DNA (720bp) protein (240aa)
Calcineurin-like phosphoesterase n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TJH2_9FIRM
Calcineurin-like phosphoesterase {ECO:0000313|EMBL:CDC73523.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
Calcineurin-like phosphoesterase.
L3_106_000M1_scaffold_661_22
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13635..14018)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6US29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC73522.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
Helix-turn-helix.
L3_106_000M1_scaffold_661_23
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14162..14521
DNA (360bp) protein (120aa)
Helix-turn-helix n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TMV7_9FIRM
Helix-turn-helix {ECO:0000313|EMBL:CDC73520.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
Helix-turn-helix.
L3_106_000M1_scaffold_661_24
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(14563..14856)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YGC1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14622.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
transcriptional regulator, XRE family
L3_106_000M1_scaffold_661_25
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15671..16276
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74913.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_106_000M1_scaffold_661_26
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16269..18149
DNA (1881bp) protein (627aa)
Resolvase, N-terminal domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQP9_9FIRM
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EFB74914.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_106_000M1_scaffold_661_27
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18150..18935
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74915.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_106_000M1_scaffold_661_28
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18946..19353
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74916.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_106_000M1_scaffold_661_29
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19334..20287
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74917.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L3_106_000M1_scaffold_661_30
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20287..21156
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PQQ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB74918.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
Displaying items 1-30 of 79 in total

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