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L3_106_000M1_scaffold_724

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_724_1
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..206)
DNA (204bp) protein (68aa)
Methyltransferase domain protein n=3 Tax=Lachnospiraceae RepID=A7B8N2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48460.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_106_000M1_scaffold_724_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(260..1636)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BYH3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20218.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
putative efflux protein, MATE family
L3_106_000M1_scaffold_724_3
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1846..3300)
DNA (1455bp) protein (485aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BZH1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48462.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
flotillin
L3_106_000M1_scaffold_724_4
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3474..4592
DNA (1119bp) protein (373aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B8N5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48463.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
CdaR family transcriptional regulator
L3_106_000M1_scaffold_724_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4722..6113
DNA (1392bp) protein (464aa)
GntP family permease n=3 Tax=Lachnospiraceae RepID=A7B8N6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20215.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
gluconate transporter
L3_106_000M1_scaffold_724_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6150..7298
DNA (1149bp) protein (383aa)
glycerate kinase (EC:2.7.1.31)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BYL9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20214.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_106_000M1_scaffold_724_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7227..9881)
DNA (2655bp) protein (885aa)
Uncharacterized protein n=2 Tax=Ruminococcus gnavus RepID=A7B8N9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20213.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_106_000M1_scaffold_724_8
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9865..10833)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68015.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
glycosyl transferase family protein
L3_106_000M1_scaffold_724_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11273..11839)
DNA (567bp) protein (189aa)
Flavin reductase n=3 Tax=Lachnospiraceae RepID=A7B4G3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20153.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Multimeric flavodoxin WrbA
L3_106_000M1_scaffold_724_10
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11936..13420)
DNA (1485bp) protein (495aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BZA5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48532.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
carbon starvation protein
L3_106_000M1_scaffold_724_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13628..14773)
DNA (1146bp) protein (382aa)
lactaldehyde reductase (EC:1.1.1.77)
Lactaldehyde reductase n=3 Tax=Lachnospiraceae RepID=A7B4G5_RUMGN
Lactaldehyde reductase {ECO:0000313|EMBL:ETD20151.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_106_000M1_scaffold_724_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14851..15438)
DNA (588bp) protein (196aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B4G6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48534.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
transcriptional regulator
L3_106_000M1_scaffold_724_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15464..16498)
DNA (1035bp) protein (345aa)
bglA; putative 6-phospho-beta-glucosidase (EC:3.2.1.86)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BYF5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48535.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_106_000M1_scaffold_724_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16517..17791)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BYA5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48536.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
PTS trehalose transporter subunit IIBC
L3_106_000M1_scaffold_724_15
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17809..18375)
DNA (567bp) protein (189aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BYA5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48536.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
PTS beta-glucoside transporter subunit IIABC
L3_106_000M1_scaffold_724_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18394..19932)
DNA (1539bp) protein (513aa)
NADH oxidase (EC:1.-.-.-)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BZA0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48538.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_106_000M1_scaffold_724_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20072..20239)
DNA (168bp) protein (56aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8C080_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20146.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
L3_106_000M1_scaffold_724_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20412..21110
DNA (699bp) protein (233aa)
Cyclic nucleotide-binding protein n=1 Tax=Clostridium botulinum (strain Kyoto / Type A2) RepID=C1FQX5_CLOBJ
cyclic nucleotide-binding protein
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:ACO85469.1}; TaxID=536232 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Kyoto / Type A2).;"
L3_106_000M1_scaffold_724_19
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21212..21949)
DNA (738bp) protein (246aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B4H5_RUMGN
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDN77252.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Predicted transcriptional regulators
L3_106_000M1_scaffold_724_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22046..23941)
DNA (1896bp) protein (632aa)
Uncharacterized protein n=2 Tax=Ruminococcus gnavus RepID=A7B4H6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20126.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
myosin-cross-reactive antigen
L3_106_000M1_scaffold_724_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24131..24697)
DNA (567bp) protein (189aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BZC7_RUMGN
Putative dihydroxyacetone kinase regulator {ECO:0000313|EMBL:EDN77254.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
transcriptional regulator
L3_106_000M1_scaffold_724_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24851..25969
DNA (1119bp) protein (373aa)
Inosine-uridine nucleoside N-ribohydrolase (EC:3.2.2.1)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BYC8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48563.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_106_000M1_scaffold_724_23
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25966..26532
DNA (567bp) protein (189aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BY83_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN48564.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_106_000M1_scaffold_724_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26544..27233
DNA (690bp) protein (230aa)
Radical SAM domain protein n=4 Tax=Clostridiales RepID=A7B4I1_RUMGN
TIGR01210 family protein {ECO:0000313|EMBL:ETD20122.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
radical SAM protein
L3_106_000M1_scaffold_724_25
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27252..28097)
DNA (846bp) protein (282aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B4I2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20121.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_106_000M1_scaffold_724_26
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28125..29069)
DNA (945bp) protein (315aa)
Peptidase, C39 family n=4 Tax=Clostridiales RepID=A7B4I3_RUMGN
Peptidase, C39 family {ECO:0000313|EMBL:EDN77260.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_106_000M1_scaffold_724_27
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29102..29452)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68030.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_106_000M1_scaffold_724_28
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29503..30786)
DNA (1284bp) protein (428aa)
phosphoribosyl-ATP pyrophosphohydrolase (EC:3.6.1.31 3.5.4.19)
Phosphoribosyl-ATP diphosphatase n=3 Tax=Clostridiales RepID=R5UA60_9FIRM
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019, ECO:0000256|SAAS:SAAS00015509}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_106_000M1_scaffold_724_29
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30801..31391)
DNA (591bp) protein (197aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=2 Tax=Lachnospiraceae RepID=F7JWH2_9FIRM
L3_106_000M1_scaffold_724_30
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31394..32692)
DNA (1299bp) protein (433aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=2 Tax=Lachnospiraceae RepID=F7JW69_9FIRM
Displaying items 1-30 of 68 in total

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