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L3_106_000M1_scaffold_751

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000M1_scaffold_751_1
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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133..537
DNA (405bp) protein (135aa)
Acetyltransferase (GNAT) family. (EC:2.3.1.-)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TY31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49680.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_106_000M1_scaffold_751_2
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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593..3208
DNA (2616bp) protein (872aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TRB1_9FIRM
L3_106_000M1_scaffold_751_3
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3211..3792
DNA (582bp) protein (194aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UAP7_9FIRM
L3_106_000M1_scaffold_751_4
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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3789..4586
DNA (798bp) protein (266aa)
Metallo-beta-lactamase domain protein n=3 Tax=Lachnospiraceae RepID=A7AZ03_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49677.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Metal-dependent hydrolases of the beta-lactamase superfamily I
L3_106_000M1_scaffold_751_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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4604..4876
DNA (273bp) protein (91aa)
UPF0237 protein RUMGNA_00517 n=3 Tax=Lachnospiraceae RepID=A7AZ02_RUMGN
UPF0237 protein HMPREF0991_00010 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ACT domain-containing protein
L3_106_000M1_scaffold_751_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4904..6268
DNA (1365bp) protein (455aa)
UPF0210 protein RUMGNA_00516 n=3 Tax=Lachnospiraceae RepID=A7AZ01_RUMGN
UPF0210 protein HMPREF1201_00408 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_106_000M1_scaffold_751_7
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6285..7145
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TSG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68713.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
EDD domain protein, DegV family
L3_106_000M1_scaffold_751_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7275..7946
DNA (672bp) protein (224aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BZ56_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49673.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_106_000M1_scaffold_751_9
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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7930..9306
DNA (1377bp) protein (459aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
sensor histidine kinase (EC:2.7.3.-)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BZ04_RUMGN
L3_106_000M1_scaffold_751_10
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9381..10157
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UC24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68716.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
multidrug ABC transporter permease
L3_106_000M1_scaffold_751_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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10326..10796
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Enterococcus faecium EnGen0057 RepID=L2SMP0_ENTFC
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EEA79981.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_106_000M1_scaffold_751_12
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10898..11635
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TSH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68718.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_106_000M1_scaffold_751_13
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11649..12296
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TZD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68719.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_106_000M1_scaffold_751_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12356..13360)
DNA (1005bp) protein (335aa)
CAAX amino terminal protease family protein n=3 Tax=Clostridiales RepID=A7B5N4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20366.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
CAAX amino terminal protease family.
L3_106_000M1_scaffold_751_15
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13377..14666)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=A7B5N3_RUMGN
UPF0348 protein HMPREF0991_01187 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Predicted nucleotidyltransferase
L3_106_000M1_scaffold_751_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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14749..16101
DNA (1353bp) protein (451aa)
Magnesium transporter n=2 Tax=Lachnospiraceae RepID=A7B5N2_RUMGN
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
magnesium transporter
L3_106_000M1_scaffold_751_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16358..17353
DNA (996bp) protein (332aa)
phosphate acetyltransferase (EC:2.3.1.8)
Phosphate acetyltransferase n=3 Tax=Clostridiales RepID=F7JVM6_9FIRM
Phosphate acetyltransferase {ECO:0000313|EMBL:EGN48905.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_106_000M1_scaffold_751_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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17413..18612
DNA (1200bp) protein (400aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
acetate kinase (EC:2.7.2.1)
Acetate kinase n=2 Tax=Lachnospiraceae RepID=A7B5M9_RUMGN
L3_106_000M1_scaffold_751_19
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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18777..19304
DNA (528bp) protein (176aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=V8C0T7_RUMGN
Putative ACR COG1399 {ECO:0000313|EMBL:CCZ68725.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Predicted metal-binding, possibly nucleic acid-binding protein
L3_106_000M1_scaffold_751_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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19308..19487
DNA (180bp) protein (60aa)
50S ribosomal protein L32 n=4 Tax=Clostridiales RepID=A7B5M7_RUMGN
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ribosomal protein L32
L3_106_000M1_scaffold_751_21
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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19620..20648
DNA (1029bp) protein (343aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
Phosphate acyltransferase n=3 Tax=Clostridiales RepID=A7B5M6_RUMGN
phosphate:acyl-[acyl carrier protein] acyltransferase
L3_106_000M1_scaffold_751_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20674..20904
DNA (231bp) protein (77aa)
Phosphate acyltransferase n=4 Tax=Clostridiales RepID=F7JVN0_9FIRM
Acyl carrier protein {ECO:0000256|RuleBase:RU003545}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
acyl carrier protein
L3_106_000M1_scaffold_751_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21017..21706
DNA (690bp) protein (230aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
RNAse III (EC:3.1.26.3)
Ribonuclease 3 n=4 Tax=Clostridiales RepID=A7B5M4_RUMGN
L3_106_000M1_scaffold_751_24
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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21719..25276
DNA (3558bp) protein (1186aa)
Chromosome partition protein Smc n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TSK8_9FIRM
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
condensin subunit Smc
L3_106_000M1_scaffold_751_25
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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25302..26252
DNA (951bp) protein (317aa)
Signal recognition particle receptor FtsY n=2 Tax=Lachnospiraceae RepID=F7JVN4_9FIRM
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
signal recognition particle-docking protein FtsY
L3_106_000M1_scaffold_751_26
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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26287..27501
DNA (1215bp) protein (405aa)
threonine dehydratase, medium form (EC:4.3.1.19)
Threonine dehydratase n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5UIU9_9FIRM
Threonine dehydratase {ECO:0000313|EMBL:CCZ68732.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_106_000M1_scaffold_751_27
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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27600..28121
DNA (522bp) protein (174aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5TSI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ68733.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
hypothetical protein
L3_106_000M1_scaffold_751_28
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28219..28416
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B5L9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76806.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L3_106_000M1_scaffold_751_29
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28443..29909
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TSL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN48916.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_106_000M1_scaffold_751_30
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30012..30332
DNA (321bp) protein (107aa)
TfoX N-terminal domain protein n=4 Tax=Clostridiales RepID=A7B5L6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20350.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Regulator of competence-specific genes
Displaying items 1-30 of 63 in total

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